Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere14g0454 ATGATGGTCATGGGCAGTCAGAGCCAGCTACTCGTGGAATGGAATCCTGAGTATGTGTTTGATGAAGTTCCATTCCCTCTCACGTACCAATTCCCCTCATATGACTTCTGTGGAACTGGTAATGGATATTTAGGACTGGAATGGCCTTATGAAGTTGCCATTCCTGGGATGGAACCAGAACCTTTGTATGAAACTCTGGCTATTGAACCAGCACCCAGCGTACAAGATAATGGCTTTTATGATATTGAAAAGGGGCTAGGAGTATGGAAAGAAATTGATGATGGGTTTGATTCAGATAAACCTGTTGTTTTATTCAGCAAGAACGGAGAAAGTGGGGAGGAAATGAAGGAAGATGGGATGGTGAAGCGATCACGCAGAGAAGAGAGAAGTAATAGCACCAAAATGTTATCAAGGAAGACAATTTCTCAGTACTTCTACATGCCCATTACACAAGCAGCCAGGGAGCTTAATGTGGGTCTCACACTACTGAAGAAAAGGTGCAGAGAATTGGGAATAAGAAGGTGGCCTCATAGGAAGCTGATGAGCCTTCAAACTTTGATAAACAATGTACAGAAGCTGGGGAAGGAGGGAGGCCAGGAAAGTGAAGAGAAGCTTAGGAATGCCATTGAGATATTGGCGAAGGAGAAGAAGCTGATGGAGGAGATGCCAGATTTGCAGCTTGAAGATAACACAAAGAGGCTTAGACAAGCCTGTTTCAAGGCAAACTACAAGAAAAGAAAGCTTTTGTCAATGGAATTTCATTCTACAAGGGATGAATATAATTATAATGAACAAGTACAAGACATCAAGCATCTGTTGACATCACACCCTCTCCCATCTTACAACATAGATGTTCTTACGAGTTTAGAATAG 873 0.4227 MMVMGSQSQLLVEWNPEYVFDEVPFPLTYQFPSYDFCGTGNGYLGLEWPYEVAIPGMEPEPLYETLAIEPAPSVQDNGFYDIEKGLGVWKEIDDGFDSDKPVVLFSKNGESGEEMKEDGMVKRSRREERSNSTKMLSRKTISQYFYMPITQAARELNVGLTLLKKRCRELGIRRWPHRKLMSLQTLINNVQKLGKEGGQESEEKLRNAIEILAKEKKLMEEMPDLQLEDNTKRLRQACFKANYKKRKLLSMEFHSTRDEYNYNEQVQDIKHLLTSHPLPSYNIDVLTSLE 290
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere14g0454 290 PANTHER PROTEIN RKD4 117 250 IPR044607 GO:0003700
Dere14g0454 290 MobiDBLite consensus disorder prediction 109 133 - -
Dere14g0454 290 ProSiteProfiles RWP-RK domain profile. 116 203 IPR003035 -
Dere14g0454 290 Pfam RWP-RK domain 136 183 IPR003035 -
Dere14g0454 290 MobiDBLite consensus disorder prediction 110 133 - -
Dere14g0454 290 Coils Coil 202 222 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere14g0454 Dere-ChrDere14 4667765 4668965 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere14g0454 122 247 AtRKD Transcription Factor Family AT1G18790 68.750 4.20e-56 180
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF RWP-RK Dere14g0454 RWP-RK 4.9e-21 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere14g0454 14 4667765 4668965 Dere14g0454 14 4667765 4668965 ECH