Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere14g0436 ATGGAGACTGAAGAACTTAGTTTGAACAAAGAATCTGTTATTGGTGCTGCAAACAATAGCAAGAATGGTGATGGGTTCATTGATAGAAGCAACGTGAGGATTTTGTTGTGTGATAACGATGCCAAGAGTTCGGAAGAGGTGTTTACGCTTCTCTTGAGGTGCTCTTATCAGGTTACTTCAGTAAGGTCAGCAAGACAGGTAATTGATGCACTGAACGCAGAGGGGCAAGATATAGACATCATACTTGCTGAAGTTGACCTCCCTTTGAAGAAGGGCATGAAGATGTTGAAGTACATAGCACGGGACAAAGAACTGCACCGAATTCCTGTTATAATGATGTCAGCACAGGATGAGGTATCCATTGTTGTTAAGTGCTTGAGACTGGGTGCGGCAGACTATCTAGTAAAGCCTTTACGCACTAATGAACTATTAAATTTGTGGACACACATGTGGAGAAGGAGGCGCATGCTTGGGCTCGTAGAGAAGAACATCTTCAACTATGACTTTGATCTGGTAGCGTCAGATCCTAGTGATGCTAATACAAACAGTACCACCTTGTTCTCAGATGACACAGATGACAAATCCAAGAGAAGTACTAATCCAGATACAGGAGTGCCTATCCAACAGGAACATGAGTCTACTGTTGCTGTTGCCACTGCTGCTACAGTTGTTGAGGAGCTTCCAGATGCTCATGCATCAGAATATCGCCCTGATGTTCCTGGAATTAGTGATCGCCGAACAGGACATTTTTCAAATGGTCCAAAGAAGAGTGAATTAAGGATTGGGGAGTCATCAGCCTTCTTCACTTATGTTAAAGCGACCACAATAAAGAGCAACTCCCAAGGAGTTATTCATGTTGATCATAATGCTGCTGCACAGTTGAGCATGGAAGATAAGCATCAAGCATGCACTGAACAGGGGGTTAATGATCTTCAAATACATGAAAATGGAGAGACATGTGAAAGCCATTCACAGGATGACTTACCCAGCAGTAATAGTATCCCCGATTCTTTCTCCATTGAAAGGTCTTCTACTCCACCTGCATCAATGGAAAGTTTACAGCAAAAACACCTTATGGAAGAACATTTACCCCAGGGCATGATCCATCCAAAAAATGGAACTCAGAATTCTGAGCTTGAAATATCTGGCATGCCAGCCCAACATCATTATCCATATTATATTTCAGGAGTTGTTAATTCTGTAATGATGCCATCATCAGCACAACTGTATCAAAAGAATCTCCAAGACCTGCAGACTCATGCTAGTACAGCTATGATTGCACAGTACAACCATCTTTCCCAATGCCCTCCTCATGCAACTGGGATGACGTCCTTCCCATATTACCCAATGAATATATGCTTACAACCTGGGCAGATGTCTATGGTTCATTCATGGCCATCATTTGGAGGTTCAAGTTCATCTGAAGTCAAATTAAGTAAAGTTGATAGAAGAGAAGCAGCATTGATGAAGTTTAGACAGAAAAGGAAAGAGCGTTGCTTTGATAAGAAAATTAGATATGTCAATAGGAAACGACTTGCTGAAAGGCGGCCTCGTGTGAGGGGACAGTTTGTCAGAAAGTTGAATGGAGTAAATGTAGATCTTAATGGACAACCTGCTTGCACTGAATATGATGAGGATGATGAAGAGGATGAAGAGGATCATGCAGCAAGAGACTCCACTCCTGAGGATGCTTGA 1695 0.4224 METEELSLNKESVIGAANNSKNGDGFIDRSNVRILLCDNDAKSSEEVFTLLLRCSYQVTSVRSARQVIDALNAEGQDIDIILAEVDLPLKKGMKMLKYIARDKELHRIPVIMMSAQDEVSIVVKCLRLGAADYLVKPLRTNELLNLWTHMWRRRRMLGLVEKNIFNYDFDLVASDPSDANTNSTTLFSDDTDDKSKRSTNPDTGVPIQQEHESTVAVATAATVVEELPDAHASEYRPDVPGISDRRTGHFSNGPKKSELRIGESSAFFTYVKATTIKSNSQGVIHVDHNAAAQLSMEDKHQACTEQGVNDLQIHENGETCESHSQDDLPSSNSIPDSFSIERSSTPPASMESLQQKHLMEEHLPQGMIHPKNGTQNSELEISGMPAQHHYPYYISGVVNSVMMPSSAQLYQKNLQDLQTHASTAMIAQYNHLSQCPPHATGMTSFPYYPMNICLQPGQMSMVHSWPSFGGSSSSEVKLSKVDRREAALMKFRQKRKERCFDKKIRYVNRKRLAERRPRVRGQFVRKLNGVNVDLNGQPACTEYDEDDEEDEEDHAARDSTPEDA 564
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere14g0436 564 ProSiteProfiles CCT domain profile. 484 526 IPR010402 GO:0005515
Dere14g0436 564 MobiDBLite consensus disorder prediction 323 349 - -
Dere14g0436 564 MobiDBLite consensus disorder prediction 540 556 - -
Dere14g0436 564 MobiDBLite consensus disorder prediction 180 212 - -
Dere14g0436 564 Gene3D - 32 233 - -
Dere14g0436 564 MobiDBLite consensus disorder prediction 229 253 - -
Dere14g0436 564 SMART REC_2 32 147 IPR001789 GO:0000160
Dere14g0436 564 Pfam Response regulator receiver domain 34 145 IPR001789 GO:0000160
Dere14g0436 564 SUPERFAMILY CheY-like 28 157 IPR011006 -
Dere14g0436 564 MobiDBLite consensus disorder prediction 532 564 - -
Dere14g0436 564 PANTHER TWO-COMPONENT RESPONSE REGULATOR 32 241 IPR045279 GO:0009736
Dere14g0436 564 MobiDBLite consensus disorder prediction 228 257 - -
Dere14g0436 564 MobiDBLite consensus disorder prediction 318 349 - -
Dere14g0436 564 Pfam CCT motif 484 526 IPR010402 GO:0005515
Dere14g0436 564 ProSiteProfiles Response regulatory domain profile. 33 151 IPR001789 GO:0000160
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere14g0436 Dere-ChrDere14 4555819 4560949 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere14g0436 21 563 Response Regulator Gene Family AT5G61380 51.115 0.0 551
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Pseudo ARR-B Dere14g0436 Response_reg 2.7e-17 CL0304
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere14g0436 14 4555819 4560949 Dere14g0436 14 4555819 4560949 ECH