Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere14g0428 ATGGCGCTGTTCAAAAGATTCTTTTACAGGAAGCCCCCAGATCGACTTTTGGAGATCTCTGAGAGGGTCTATGTGTTTGATTGCTGCTTCTCGACGGATGTAATGGAAGAAGATGAGTATAGAGTATATATGGGGGGAATTATGGCTCAGCTACAAGATCACTTTCCAGATGCTTCTTTCACAGTTTTTAACTTTAGAGAAGGGGAGAAGCACACCCTAATTTCAGACATACTGTCTGAGTATGACATGACAGTGATGGAATACCCTCGGCAATTCGAGGGTTGTCCACTTTTGCCTTTGGAGATGATTCATCACTTCCTTCGATCAAGTGAAAGCTGGTTGTCATTGGTGGGGCAAAGAAATGTACTTTTGATGCACTGTGAAAGGGGAGGCTGGCCAGTGCTTGCATTTATGCTTGCGAGTCTTCTATTGTATCGAAAACAGTACAATGGGGAGCAGAAGACTCTTGAAATGGTGTACAAGCAAGCCCCTAGAGAACTTCTTTACATTTTATCTCCTTTGAACCCACAACCTTCTCAGTTGAGGTATCTTCAGTATATTTCCAGGAGAAATTTGGGTTTCGAGTGGCCTCCATCAGACACACCCATACATTTGGATTGTCTAATTCTTAGAGACCTTCCATTATTTGACGGTGGAAAAGGTTGCCGCCCTGTTGTGCGTGTTTATGGTCAAGATCCTTCTTCAAAAAGTAGTTCTAAGCTTCTATTTACAACTAATTCAAAGACTAAAAAATATGTTCGTTATTACCAACAGGCAGAATGTATGCTTGTGAAAATTGACATCCATTGTCGTGTTCAAGGAGATGTTGTTCTTGAGTGCATACATTTGTATGAAGATTTCATTAGCGAGGAGGTTATGTTTAGAGCTATGTTTCATACCGCATATGTGCGATCAAATATATTGATGCTCAATTGTGATGAAGTTGATATTTTGTGGGATGCAAAAGATAATTTTCCTAAGGACTTCAAAGCAGAGGTGCTTTTCTTGGACAATGATGTTGTTTTACCTAATATAATCACAACTACAACGACTGAAGATTCAAATGAGGCAGGGTATGCTTCACCTGAGGAATTTTATGAGGTGGAAGAGATCTTTAGCAATGTAGTTGATGCGCGGGAAGTTAAGGGGGAAAATGATTCTTCTCAGGTTCTTGACAATGCAGTTAATGGCAAAAATAACAAAGTTGTATGGAAAGAGGTTTTGGATCCTCACACTTTTCAGGATTGTACATCAGATGATGGGATTCATAAACAGGATGGAAGGACAAATTCTACGATTCAAGCAGTGAAAGATATTGCTGTTGATGATGTGAAGTACAAGGTTGATGAGAGCGTAGATTCAGATTCTCATGCAGTAAAAGATATTGTTGTGGATGATGGAGAAATTAAGTCAACTTCTATGGTAGACAGTATTGATGTGATGAAAAATGTGGAAGCAAGGGAAGTTGCTGTGGATTTGCATGGACAATTTGTTGATATAGGAATCAACTATGATGAAGATAATTATGCAACAGAAATGAAATTAGACACCATGGCAGGGCAGCTGAAGCCTGATCTTTCCAAACAGAAATCTGATAAATTACTCCCATCTACTGCAAGGAAACAACTTTCATCAAACTCAAAACTAGTGGGAAATACATTTACAGCGAAGCAAAAGACTAAATTGCAAGAACTACAAGTTGGCCAAGCAAAATTGGCAAAGCCAAATGCGATAACTAGGTGGATTCCTTCCAACAAAACTTCTTATACAAATTCAATGCATGTCTTGTATACGAAGCATAATATTGCACCATCTGCTCTTGCAAATGCTAACTCTCGAAAGGAGAAAAGTGCCTCTGAAGCAGCTGTATCTATCAACATGAAAAATAAGCAGAAAATTCGGAAGCAAAGATCTTTAGATTGCATAAATGGCTCACTATCAAATAAACTAAAATTTCATAAGCTAGCTGCTTCAAGATCTTCAGACCGTTTAGCAGAAATGGATGCAGACTGCTCCTCATCATCATTACCATCAATTGAGGAGACATACATTCAGTTAGCAACTCAAGCACTAGAATTGAGCTCAAACCAAGGTCCACCTGCCCCTCCCCCACGGTCTCCACCTCTAGCTTCATTTCATGTTGGAAACTCTTCTTCACAGGTTTTTGAATCCTTATCATTACAAGATGATGTGCTCTCTCCATCTCAATTATTTTCATCATCTTCCTTATTGGATGTAAACGTACCTATTCAACCGCCACTACCAATAATTACCTCACCATCATTCAGGGAGCAAAACGTAAAGATGGATATACCACATGAAACTTCTCCATCTTCTCCTCCACCACTGCCTCCCCTTCCACCTCTAACTCCATCATTTGTTAGGCATATTAGGAGTTTCCCATCTCCTCCACCCCCTCAGAAGGTTGTTTATTCATCAACTGTTGTTGATGAAATGACTAGTGGTGCTCCATGTCCTCCTCCAACTAGTCCACTCCCCTTTGCAAGTGAAACATTTTCTATAAAAGTTTCTACAGTGCTAGATGCCTCTGCCCCTCCTCTACCACCTCCCTTTATAAAATATAAAGCTTCCTCTCCTCCTCCTCCTCCTCCTCCTCCTATTCCCCCTCTCCGTCCTCCTCCTACTTCTTCCATAGTTAGGATTCCATCCCCTCCACCACCATCACCCTTAAATACATCACATATAGCTTCACCTTCACCACCTGTACATGATTCATCTGGCCCACCTTCACCTTTACATTCTTTAAGTAGATCTCAACCTTCGCCTCGTTTAGCTTCTTGTAGAGCTTTTCCAGCCCTACCCCCACCTCCCTCACCACCAACTTCACCTCGTTTAACTTCTTGTAGAGTTTTTCCATCCCGATCTGAACGTCATTTTGGTAATGCTCCATCACCACCTCTATCTCTGCCTCCTTTAAGCAATGCTCCACCATTACCACCACCTCCACCTCCATTAAGTAATGCTTCATTGCCGCCTCCACCACTACCTCTTTTAAGTAATGTTCAAGTGCCTTTGCCTACACCGTTACCTTCTTCAGATAATGTTTTTCTTCCCTCACCTCTATCCGCTTCTCCTCCACTTCCTTCAAGTAATGCTTTACCACCCTCATCCCTAGCCCCACCTCCTTCAAGTAATGTTTTACCACCCCCACCCTCACCCTCACCCCCACTGTCACCTTTATCTCCACCTTCATTACCTTTTAGTAGAGCTTTGTCACCTCCACCTTCATTAAGTGAAGCATCATCCTTACCATCATTGCCCCTATCAAGTGTAGTTACACCTCCACCACATTGGCCACCACTATTAAGTGAAGCACCACCTCTACCACGACCCTCACTTCTATCCCAATCAAGTGCATCGCCTTTTCCATCACCACCACCTCTATTAAGTGCAGCACCACCTCCATCTCAACTCTCACCATTATCAAGTGTAACACCCCCTCCACCCCCACCCCCACCCCCACCCCCACTCCCACTAACCCTATTAAAAGTAGCACCACATTCACCCCCTTCATGTGGAGTCCCTTTATTACAACTACCTCCAATATTTGAAACTCCACCTCCCTTACCTCAGCCACTTCATAAAGCATCAACTTTGCCTCCTCCACTGCCACCCCTATTAAGTGGAACATCACCTCCACCACCACCACCACCTCTATCATGTCAATTACTTCCATCGCAACCACATTTAATGTTTGGAGCTCTACCTACGCCACCTACTTGTGATCAAAGCTCATCTCCACCTCCACCTCCACCTCTACCTCCACCTCTATCCTTTTCTAATGGTAAAGACCCACTGTCTCCTCAATTTCCTCCTAGTAGTCAAAGCCCACCTTCGCCTTTGCCTTTTCTTGGTGAACAAGGCCCAGGCTCACCTCCACCTCCACCTCCACCTCCACCTCCACCTCCACCCCCGCCTCCACCTTTGCCTCTGCCTTCTTCTAGTGGACACGGGCCACCTTTTCTTGAGCCTTCTCCCAATGGACATGGCCTGTCTACGCCTCCACTTTCTCTCGTTGAACATGGCCCGCCTCTTCCTCCACCTCCACCTCCACCTCCACCTCCTTTTAGTGGACATGACCCACCTCCGCCTTTGTCTCTACCGAGTGGACATGGTCAACCTCCGCCTCCGCCTCCACCTCCTTCTAATGGACAAGGCCCGCCTCCACCTCTGCCTCCTCCTGGTGGACATGGCCTGCCTCCGCCACCACTTAGTGGACCTGGCCCACCTCCACCTCCGCCTCCTCTCAGTGGACCAGGTCCGCCTCCACCTCCGCCTCCGCCTCCTCTCAGTGGACCGGGTCCGCCTCCACCTCCGCCTCCGCCTTCTCTCAGTGGACCGGGCCCGCCTCCACCTCCGCCTCTTCTCAGTGGACCAGGCCCGCCTCCACCTCCACCTCCTCTTGGTGGACCAGGCCCGCCTCCGCCTCCCCCTCAACTTGGTGGTCAAGGTCCACCTCCACCTCCCCCTCCTGGAGCACGGGCTCCTGGTGCACCTGCTCCTCCTGGACCTCCTGGGGGTGCACCTCCACCTCCTGGAGCTGGTCCAAGTGGGAGAGGGCGTGGACTGTCACGTGCTGCAACAACCCCTCGACGATCCTCTTTAAAGCCTTTATATTGGGGTAAGGTGTCAAGGGCATTGCAAGGAAGTTTATGGGAAGAATTACAGAGACGTGGTCAACCTCAAATTGCACCAGAATTTGATGTTTCAGAGATAGAGACCCTTTTCTCAGCAGTTGTTCCAAAACCTGCTGATAAATCTGTAGGGCGCTGCAAGTCTGTTGGATCTAAAACTGACAAAGTCCACTTGATTGAACTGAAGAGGGCCAATAATGTTGAAATTATGCTCACAAAGGTTAAGATGCCACTTTCTGATATGATGGGATACACTGGTGACGTTGAGAATTTGGGAAAATGTGAACAGTATTTTTTGGAGCATATGAAAGTGCCACGAGTGGAAGCAAAATTAGCAGTTTTTTCTTTCAAGATTCAGTTTAATTGTCAGATTGTTGAATTTAAGAATAGCTTAAGCACTGTGAACGCTGCCTGTGAAGAGGTCCGAAAATCTGACAAACTGAAGGATATTATGCAGAAAATTCTTTATTTGGGGAATACTCTGAATCAAGGAACAGCAAGGGGGTCTGCTGTTGGATTCAAGTTAGATAGTCTTTTAAAGCTCACAGAGACTCGTGCTTCTACTGGTAGGATGACACTAATGCATTATCTATGCAAGGTCCTAGCTGAAAAGTCTCCTGCACTGCTTGATTTTCACTTGGACCTTGTTAGCCTGGAAGTTGCTAGCAAGATACAATTGAAAGCATTAGCAGAAGAGATGGCAGCAATTAACAAGGGATTACGAAAGGTTAAACAGGAGCTTGCAGCATCTGAAAATGATGGCCCTGTGGCTGAGACTTTCCGTAAGACACTGAAAGAATTTGTTGATGGTGCTGAGTTAGAGGAGGCAAATGTATCAAACCTATATTCAGTGGCGGGTAAAAATGCAGATGATCTTGCAAAATATTTTGGTGAAGACCCTGCTCGTTACCCATTTGAGCAAGTAACTGCAACTCTATTAAATTTCATACGGTTGTTTCGGAAAGCACACGAAGAGAACATAAAACAAGCAGAGTTGGAGAAGAAGAAAGCTGAGAAAGAGGCAGAAATGGAGAAGGATAAGGATAAGGATAAGGATAAGGCTAAGGCCTCTTCTGTGTCATTCAAAGAGGAAATTTTGTAG 5757 0.4509 MALFKRFFYRKPPDRLLEISERVYVFDCCFSTDVMEEDEYRVYMGGIMAQLQDHFPDASFTVFNFREGEKHTLISDILSEYDMTVMEYPRQFEGCPLLPLEMIHHFLRSSESWLSLVGQRNVLLMHCERGGWPVLAFMLASLLLYRKQYNGEQKTLEMVYKQAPRELLYILSPLNPQPSQLRYLQYISRRNLGFEWPPSDTPIHLDCLILRDLPLFDGGKGCRPVVRVYGQDPSSKSSSKLLFTTNSKTKKYVRYYQQAECMLVKIDIHCRVQGDVVLECIHLYEDFISEEVMFRAMFHTAYVRSNILMLNCDEVDILWDAKDNFPKDFKAEVLFLDNDVVLPNIITTTTTEDSNEAGYASPEEFYEVEEIFSNVVDAREVKGENDSSQVLDNAVNGKNNKVVWKEVLDPHTFQDCTSDDGIHKQDGRTNSTIQAVKDIAVDDVKYKVDESVDSDSHAVKDIVVDDGEIKSTSMVDSIDVMKNVEAREVAVDLHGQFVDIGINYDEDNYATEMKLDTMAGQLKPDLSKQKSDKLLPSTARKQLSSNSKLVGNTFTAKQKTKLQELQVGQAKLAKPNAITRWIPSNKTSYTNSMHVLYTKHNIAPSALANANSRKEKSASEAAVSINMKNKQKIRKQRSLDCINGSLSNKLKFHKLAASRSSDRLAEMDADCSSSSLPSIEETYIQLATQALELSSNQGPPAPPPRSPPLASFHVGNSSSQVFESLSLQDDVLSPSQLFSSSSLLDVNVPIQPPLPIITSPSFREQNVKMDIPHETSPSSPPPLPPLPPLTPSFVRHIRSFPSPPPPQKVVYSSTVVDEMTSGAPCPPPTSPLPFASETFSIKVSTVLDASAPPLPPPFIKYKASSPPPPPPPPIPPLRPPPTSSIVRIPSPPPPSPLNTSHIASPSPPVHDSSGPPSPLHSLSRSQPSPRLASCRAFPALPPPPSPPTSPRLTSCRVFPSRSERHFGNAPSPPLSLPPLSNAPPLPPPPPPLSNASLPPPPLPLLSNVQVPLPTPLPSSDNVFLPSPLSASPPLPSSNALPPSSLAPPPSSNVLPPPPSPSPPLSPLSPPSLPFSRALSPPPSLSEASSLPSLPLSSVVTPPPHWPPLLSEAPPLPRPSLLSQSSASPFPSPPPLLSAAPPPSQLSPLSSVTPPPPPPPPPPPLPLTLLKVAPHSPPSCGVPLLQLPPIFETPPPLPQPLHKASTLPPPLPPLLSGTSPPPPPPPLSCQLLPSQPHLMFGALPTPPTCDQSSSPPPPPPLPPPLSFSNGKDPLSPQFPPSSQSPPSPLPFLGEQGPGSPPPPPPPPPPPPPPPPPLPLPSSSGHGPPFLEPSPNGHGLSTPPLSLVEHGPPLPPPPPPPPPPFSGHDPPPPLSLPSGHGQPPPPPPPPSNGQGPPPPLPPPGGHGLPPPPLSGPGPPPPPPPLSGPGPPPPPPPPPLSGPGPPPPPPPPSLSGPGPPPPPPLLSGPGPPPPPPPLGGPGPPPPPPQLGGQGPPPPPPPGARAPGAPAPPGPPGGAPPPPGAGPSGRGRGLSRAATTPRRSSLKPLYWGKVSRALQGSLWEELQRRGQPQIAPEFDVSEIETLFSAVVPKPADKSVGRCKSVGSKTDKVHLIELKRANNVEIMLTKVKMPLSDMMGYTGDVENLGKCEQYFLEHMKVPRVEAKLAVFSFKIQFNCQIVEFKNSLSTVNAACEEVRKSDKLKDIMQKILYLGNTLNQGTARGSAVGFKLDSLLKLTETRASTGRMTLMHYLCKVLAEKSPALLDFHLDLVSLEVASKIQLKALAEEMAAINKGLRKVKQELAASENDGPVAETFRKTLKEFVDGAELEEANVSNLYSVAGKNADDLAKYFGEDPARYPFEQVTATLLNFIRLFRKAHEENIKQAELEKKKAEKEAEMEKDKDKDKDKAKASSVSFKEEIL 1918
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere14g0428 1918 Gene3D Formin, FH2 domain 1633 1906 IPR042201 -
Dere14g0428 1918 MobiDBLite consensus disorder prediction 854 1540 - -
Dere14g0428 1918 MobiDBLite consensus disorder prediction 1881 1918 - -
Dere14g0428 1918 Gene3D - 203 335 - -
Dere14g0428 1918 Pfam Formin Homology 2 Domain 1536 1634 IPR015425 -
Dere14g0428 1918 Pfam Formin Homology 2 Domain 1636 1871 IPR015425 -
Dere14g0428 1918 Gene3D Protein tyrosine phosphatase superfamily 14 201 IPR029021 -
Dere14g0428 1918 MobiDBLite consensus disorder prediction 1127 1170 - -
Dere14g0428 1918 MobiDBLite consensus disorder prediction 916 930 - -
Dere14g0428 1918 MobiDBLite consensus disorder prediction 1180 1230 - -
Dere14g0428 1918 ProSiteProfiles C2 tensin-type domain profile. 200 338 IPR014020 -
Dere14g0428 1918 Coils Coil 1872 1901 - -
Dere14g0428 1918 SMART it6_source 867 1915 IPR015425 -
Dere14g0428 1918 SUPERFAMILY Formin homology 2 domain (FH2 domain) 1606 1900 - -
Dere14g0428 1918 MobiDBLite consensus disorder prediction 1096 1114 - -
Dere14g0428 1918 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 201 335 IPR035892 -
Dere14g0428 1918 Gene3D Formin, FH2 domain 1530 1632 IPR042201 -
Dere14g0428 1918 MobiDBLite consensus disorder prediction 694 714 - -
Dere14g0428 1918 MobiDBLite consensus disorder prediction 1028 1077 - -
Dere14g0428 1918 MobiDBLite consensus disorder prediction 1346 1523 - -
Dere14g0428 1918 MobiDBLite consensus disorder prediction 1277 1326 - -
Dere14g0428 1918 PANTHER FORMIN-J 1 831 - -
Dere14g0428 1918 MobiDBLite consensus disorder prediction 971 1010 - -
Dere14g0428 1918 MobiDBLite consensus disorder prediction 1011 1026 - -
Dere14g0428 1918 Coils Coil 1778 1805 - -
Dere14g0428 1918 Pfam C2 domain of PTEN tumour-suppressor protein 200 335 IPR014020 -
Dere14g0428 1918 SMART PTEN_C2_2 198 337 IPR014020 -
Dere14g0428 1918 MobiDBLite consensus disorder prediction 936 950 - -
Dere14g0428 1918 MobiDBLite consensus disorder prediction 1248 1268 - -
Dere14g0428 1918 MobiDBLite consensus disorder prediction 1081 1095 - -
Dere14g0428 1918 MobiDBLite consensus disorder prediction 854 901 - -
Dere14g0428 1918 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 15 188 IPR029021 -
Dere14g0428 1918 ProSiteProfiles Formin homology-2 (FH2) domain profile. 1517 1897 IPR015425 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere14g0428 Dere-ChrDere14 4514822 4523831 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere14g0428 1 610 FH2 protein (formin) Gene Family AT5G07740 61.726 0.0 758
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere14g0428 14 4514822 4523831 Dere14g0428 14 4514822 4523831 ECH