Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere14g0425 ATGGGTTGCGTCAATTCGAGGCAGACGGTGTCGGTGACGCCGGCAGTCGACTACTCCGGTGTTTTTCGGGGCAATGCGGGTTTGGGTCATTCGGGAAGGAGCTTGGGGGAGTCGGATAATAATAATAATAAGAAGAAGAGTGAGTCAGTGGGTGAGTCTGAGAGGGGGAGTTCAAATTGGGGTTGTGATGAGTCTCTGAGCTTCAGATTGGGGAATCTGCAGAACTATGTTGAGGGAGAGCAAGTAGCCGCGGGTTGGCCGACATGGCTTACCGCCGTCGCCTGCGAAGCCATTCACGGTTGGGTGCCTCTCCGTGCCGATGCATTTGAGAAGCTCGAGAAGATTGGGCAGGGTACATACAGCAGTGTATTTCGAGCGAGGGAACTTGAGACAGGGAAGATAGTAGCACTGAAGAAGGTGCGGTTTGACATTTTTGAGCCAGAAAGTGTGAGGTTCATGGCACGAGAAATAATGATTCTGAGAAGGCTTGATCATCCAAACATCATAAAGTTGGAGGGCCTGATTGCTTCCAAATTATCGTCTAGCATTTACCTTGTGTTCGAGTACATGGAACATGACATTACAGGGCTATTGTCCTGCCCTGATATCAAATTTAGTGAATCACAGATTAAGTGCTACATGAAACAGCTGTTATCTGGACTTGAGCATTGTCATTCAAGAGGTGTAATGCATCGGGATATCAAAGGATCAAATCTACTGGTGAATAATGAAGGGATACTAAAGGTTGCTGATTTTGGATTGGCAAAGTTCTCTGTTTCTGGGCACAAGCAACCCCTCACCAGTCGAGTTGTCACCTTATGGTACCGTCCTCCTGAGCTTTTGCTGGGTTCAACAGATTATGGTCCATCTGTGGATCTATGGAGTGTTGGCTGTGTATTTGCGGAACTGCTTGTTAGGAAGCCTATTCTTCAGGGGAGAACAGAGGTGGAACAATTGCACAAAATTTTCAAACTTTGTGGCTCGCCCCCTGATGAATACTGGAAAAAGACCAGACTTCCTCATGCAACTCTGTTTAAGCCACAGCAGACATACAATAGTTGCCTCCACGAGACCTTTAAAGATTTGCCTGTGACTAGCTTGAATCTTCTAGAAACTCTTCTTTCCATTGAATCATACAAGCGTGGGACAGCTTCATCTGCCCTTTCATTGGAGTATTTCAAGACAAAGCCTTATGCATGTGACCCATCAAGCTTGCCTATATACCAGCCTAGCAAGGAGATTGATGCAAAACACTGGGAAGAGTCAAGAAGAAAAAAGATTAGTGGAAGAGTTCGTGGACCTGAAACAAGAAAACCATCAAGAAAGCCACCTGGATTCAGCAAATTAGCCCCAGCAGAGGATTTGGCTAATCAAACACGAAATTCCCAAAAGGTCAATTGTAGAACTGCCTGCATCCTTAAAGAGGAGAACACCAACGTAGGTGAGGAGGCGCCAAAGCCATCTACTGACAAAGCAGAAGATGCTTCCCATATAAAGAATGCATCTCATGGAGATATTCCCATGTTGCGAGTTTCAACATCAAGTGGCTTTGCATGGGCAAAAAGGCGTAAAGATCCTATATCAATAAGATCCCATTGTCGATCTATTTCAAGGGGACATATTTTCAATTCTTTAGAACCTTCTACATTACATCCAAGGAATAACTTTGACTCCAGATACCAGGAGAATAAGGAATTTTCTGGGGGACGCTCCAACTCAAGGGGCCGTGACACAAATGAAATCTCTAAGCTTGCAATGCTGAATCAGTGGAACAAGTTTGATCGCCCAGACTCATTTGATGCTTCTGACGAATACCACTCACAAGAACTTTCTATGGCCCTTTATCACAGAGAATATTCAGCATCCAAGAGAAGTAACCTGGATTCGGGAGAGAAGGTAGAATTTTCAGGACCCCTGCTATCTCAAATGCATACAGTTGATGAGCTCTTAGAAAGACATGAGCGTCACATTCGTCATACAGTACGAAGATCTTGGTTTCAGAAAGGTAAGAAGCATGAGAAGAAATTGGAAGGCTAA 2037 0.4482 MGCVNSRQTVSVTPAVDYSGVFRGNAGLGHSGRSLGESDNNNNKKKSESVGESERGSSNWGCDESLSFRLGNLQNYVEGEQVAAGWPTWLTAVACEAIHGWVPLRADAFEKLEKIGQGTYSSVFRARELETGKIVALKKVRFDIFEPESVRFMAREIMILRRLDHPNIIKLEGLIASKLSSSIYLVFEYMEHDITGLLSCPDIKFSESQIKCYMKQLLSGLEHCHSRGVMHRDIKGSNLLVNNEGILKVADFGLAKFSVSGHKQPLTSRVVTLWYRPPELLLGSTDYGPSVDLWSVGCVFAELLVRKPILQGRTEVEQLHKIFKLCGSPPDEYWKKTRLPHATLFKPQQTYNSCLHETFKDLPVTSLNLLETLLSIESYKRGTASSALSLEYFKTKPYACDPSSLPIYQPSKEIDAKHWEESRRKKISGRVRGPETRKPSRKPPGFSKLAPAEDLANQTRNSQKVNCRTACILKEENTNVGEEAPKPSTDKAEDASHIKNASHGDIPMLRVSTSSGFAWAKRRKDPISIRSHCRSISRGHIFNSLEPSTLHPRNNFDSRYQENKEFSGGRSNSRGRDTNEISKLAMLNQWNKFDRPDSFDASDEYHSQELSMALYHREYSASKRSNLDSGEKVEFSGPLLSQMHTVDELLERHERHIRHTVRRSWFQKGKKHEKKLEG 678
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere14g0425 678 MobiDBLite consensus disorder prediction 30 59 - -
Dere14g0425 678 ProSitePatterns Protein kinases ATP-binding region signature. 115 138 IPR017441 GO:0005524
Dere14g0425 678 ProSiteProfiles Protein kinase domain profile. 109 393 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere14g0425 678 Gene3D Transferase(Phosphotransferase) domain 1 192 432 - -
Dere14g0425 678 ProSitePatterns Serine/Threonine protein kinases active-site signature. 229 241 IPR008271 GO:0004672|GO:0006468
Dere14g0425 678 Pfam Protein kinase domain 109 393 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere14g0425 678 MobiDBLite consensus disorder prediction 416 461 - -
Dere14g0425 678 Gene3D Phosphorylase Kinase; domain 1 96 191 - -
Dere14g0425 678 MobiDBLite consensus disorder prediction 547 577 - -
Dere14g0425 678 PANTHER CELL DIVISION PROTEIN KINASE 107 397 - -
Dere14g0425 678 MobiDBLite consensus disorder prediction 416 442 - -
Dere14g0425 678 CDD STKc_CDK9_like 109 393 - -
Dere14g0425 678 SUPERFAMILY Protein kinase-like (PK-like) 102 400 IPR011009 -
Dere14g0425 678 SMART serkin_6 109 393 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere14g0425 678 FunFam probable serine/threonine-protein kinase At1g54610 96 191 - -
Dere14g0425 678 FunFam probable serine/threonine-protein kinase At1g54610 192 432 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere14g0425 Dere-ChrDere14 4475910 4480622 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere14g0425 101 425 Core Cell Cycle Gene Families AT5G10270 50.147 6.31e-109 337
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CDK-CRK7-CDK9 Dere14g0425 Pkinase 7.1e-67 CL0016