Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere14g0421 ATGTCAGAGCAGGAAACAGATTCTTGGGGCTTTCTGTTAATCTGTTTCTTAATCCTTTTTTCAGGCAAAGTTGTTGCCGGAGATTCTTTGGACACAGACGGAGATGTTCTGCTTCAGCTGAAATCGTACCTCAACGAACAAACTCTGGTAGACCGAGGACGATACACGAACTGGAACACAAGCAGTTCGAATCCCTGTGAATGGTCGGGAATCTCGTGCAGCCTCAACGGAACAACGAGGGTAGTCGGAGTGGAGCTCTCCGACAGCAACATCTCCGGCGAGATATTCCAGAACTTCTCCCAGCTCACTCTCCTCACACACCTTGACCTCTCCGGGAACACCCTCTCGGGCGAGATTCCGGCGGACTTGAGGCGGTGCCAGAAGCTCGTGTATCTGAATCTCTCGCACAATATTCTTCATGGAGAGTTGAATTTGACTGGCTTGAAAAGCTTACAAACTCTGGACTTATCAGTTAATGGGCTTCATGGGGATATTGGGTTCAACTTCCCTGCCATTTGTGACAATTTGGTGACTTTGAATATCTCAGGGAATAACTTCACTGGTAGGATTGAAGAGTGCTTCGAGCAGTGTTTGAAATTGCAATACTTGGATTTGAGCACTAATAACCTGAGTGGGGGTATATGGATGGGAATTGCGAAGCTGAGAAAGTTTTCTGTTTCAGAGAACTCTCTCAGGGGGACAATTCCTTCGTCAGCTTTTCCAGTGAACTGTAATCTTCAAATTCTGGACGTTTCAGAAAATGGGTTCATTGGGAATGCCCCGAAGGACGTTGCTAACTGTAAAAATTTGACGATTCTGAATCTTTCTAGCAACAATTTCACTGGCCTAATACCCTCTGAACTGGGTTCTATCTCGAGGCTGGAAAGATTGTTACTGGGCAACAACAGTTTCTCAAGAGACCTCCCAGAAGCACTTTTGAACTTGACCAATTTGATATTTTTGGATTTGACTCGAAATCGATTTGGTGGAGACATACAAGAGATATTTGGGAAATTCAAGCAGGTGAAGTTTCTCTTATTACACTCAAATTCTTACACTGGAGGATTATCTTCATCAGGAATTCTCAAATTGCCAAACGTTATACGCTTGGACCTAAGCTACAACAACTTTTCAGGTCCATTGCCTACAGAAATCTCTCAAATGTCAAGCCTGAAGTACTTAATGTTAGCCTACAATCAATTCACAGGACCTATTCCGCCTGAATATGGAAACTTGCCTCGCCTTCAAGCTCTTGACCTCTCCTTCAACACCCTAACTGGGCCAATCCCACCAACTCTTGGAAACTTGACCTCTCTTTTATGGCTCATGCTTGCAAATAATTCATTAACAGGTGAAATCCCAAGAGAGTTGGGAAACTGTTGGAGCTTGTTATGGCTAAACCTTGCAAACAACAAACTCACGGGAAAATTTCCTCCTGAGTTGGCCAACATAGGAAGAAACGCTGTGGTCACATTTGAATCAAATCAGCAAAATGACAAGATCATTGCTGGCTCCGGTGAGTGCTTAGCCATGAAGAGATGGATACCCGCAGATTACCCTCCATTTAGTTTTGTTTATTCCCTTCTTACGAGGAAGAATTGCAGAAGCATTTGGGATAGATTGCTCAAAGGGAAAGGAATTTTCCAGACTTGCAGTGCAGGGTCATATTCTTCGTCATCTCAGATCTCTGGTTATGTTCAGCTAAGTGGGAACCAACTCTCTGGTGAACTTCCTCCAGAAATTGGAACGATGCAGAACTTGAGTATGTTGCATTTGGGGCTTAATAAATTTTCTGGGAAACTCCCGCCAGAGATGAAAAGTATGCCTCTTGTGGTATTAAACATAACAAGAAACGAGTTTTTTGGGGAAATCCCTTGGGAAATTGGAACCATGAAGTGTTTACAGAATCTTGATCTGTCCTACAACAATTTCTCCGGGGTTTTCCCCTCAAGTTTTAACAGCTTGACAGAGCTCACCAAATTCAACATTTCTTACAATCCCTTTATTTCGGGTGAGATTCCATCGACAGGACAACTGGCTACCTTCGAGAAAAACTCCTACTTGGGGGATCCCCTCTTGGACCTCCCAAAGTTCATCGACAACGTCACCGATGATAAGAACAACACAACCTTTCACAACATACCCCTGAAAAAACCCACGAAGCTCGCTGTTTTCCTGGTTTTCTCTGCTCTGACTCTGGCTTTCTTAGTATTCGGTCTTCTGACTGTCATAGTCTGTTTACTAATAAAAACCCCATCAGAAGAACCACTCCTGAGAGAGACAAAAGTCGAACATGATTCCGGTACCTCATCTCCATGGCTGTCTGACACAATTAAGGTTATCCGATTGAACAAGACAGCTTTCACACACGCCGATATCTTGAAAGCCACAGGAAACTTCTCAGACGACAGAATCATAGGCAAAGGAGGCTTCGGAACAGTGTACAGAGGATTATTCCCAGACGGAAGAGAAGTGGCAGTGAAAAAACTCCAAAGAGACGGAATCGAAGGCGAAAAAGAATTCAGAGCCGAAATGGAAGTTCTACGCGGCCACGGCTTCGGTTGGCCCCACCCAAACCTCGTCACACTCTACGGTTGGTGCCTAGACGGTTCAGAAAAATTACTTGTTTATGAATACATCTCAGGTGGAAGCCTGGAAGATCTTGTGACTGACAGAGCAAAGCTCACGTGGAAAAGACGGTTAGAAGTAGCCATTGACGTGGCTCGAGCTCTGGTCTATTTACACCACGAATGCTACCCTTCAATTGTTCACAGAGACGTGAAGGCTAGCAACGTGTTGTTGGACAGCACAGGCAAGGCCAAAGTCACGGACTTTGGACTCGCCAGAGTGGTTGACGCCGGAGACAGCCACGTCAGCACAATGGTGGCGGGGACGGTGGGGTACGTGGCGCCTGAGTACGGCCACACGTGGAAGGCTACGACGAAAGGTGATGTGTACAGTTATGGAGTGTTGGCCATGGAGTTGGCGACAGGACGAAGAGCAGTGGATGGAGGAGAGGAGTGCTTGGTGGAATGGGGGAGGAGGGTGATGGGTTATGGAAGAAACAGGGTTATGGGTCGATCGGTTATTCCAGTTCTGTTGATGGGTTCTGGTTTGTTCGAAGGGATGGAGGAGATGGTGGCGCTGTTGAGAATTGGGGTGAAGTGTACGGCGGAGATGCCGCAGGCTCGGCCCTCCATGAAGGAGGTTCTGGCGATGCTGATAAAGATGTATAACCCCAGGGGTGATTCAAGCTATGAACATCTGGTTGGGTCATGA 3279 0.4608 MSEQETDSWGFLLICFLILFSGKVVAGDSLDTDGDVLLQLKSYLNEQTLVDRGRYTNWNTSSSNPCEWSGISCSLNGTTRVVGVELSDSNISGEIFQNFSQLTLLTHLDLSGNTLSGEIPADLRRCQKLVYLNLSHNILHGELNLTGLKSLQTLDLSVNGLHGDIGFNFPAICDNLVTLNISGNNFTGRIEECFEQCLKLQYLDLSTNNLSGGIWMGIAKLRKFSVSENSLRGTIPSSAFPVNCNLQILDVSENGFIGNAPKDVANCKNLTILNLSSNNFTGLIPSELGSISRLERLLLGNNSFSRDLPEALLNLTNLIFLDLTRNRFGGDIQEIFGKFKQVKFLLLHSNSYTGGLSSSGILKLPNVIRLDLSYNNFSGPLPTEISQMSSLKYLMLAYNQFTGPIPPEYGNLPRLQALDLSFNTLTGPIPPTLGNLTSLLWLMLANNSLTGEIPRELGNCWSLLWLNLANNKLTGKFPPELANIGRNAVVTFESNQQNDKIIAGSGECLAMKRWIPADYPPFSFVYSLLTRKNCRSIWDRLLKGKGIFQTCSAGSYSSSSQISGYVQLSGNQLSGELPPEIGTMQNLSMLHLGLNKFSGKLPPEMKSMPLVVLNITRNEFFGEIPWEIGTMKCLQNLDLSYNNFSGVFPSSFNSLTELTKFNISYNPFISGEIPSTGQLATFEKNSYLGDPLLDLPKFIDNVTDDKNNTTFHNIPLKKPTKLAVFLVFSALTLAFLVFGLLTVIVCLLIKTPSEEPLLRETKVEHDSGTSSPWLSDTIKVIRLNKTAFTHADILKATGNFSDDRIIGKGGFGTVYRGLFPDGREVAVKKLQRDGIEGEKEFRAEMEVLRGHGFGWPHPNLVTLYGWCLDGSEKLLVYEYISGGSLEDLVTDRAKLTWKRRLEVAIDVARALVYLHHECYPSIVHRDVKASNVLLDSTGKAKVTDFGLARVVDAGDSHVSTMVAGTVGYVAPEYGHTWKATTKGDVYSYGVLAMELATGRRAVDGGEECLVEWGRRVMGYGRNRVMGRSVIPVLLMGSGLFEGMEEMVALLRIGVKCTAEMPQARPSMKEVLAMLIKMYNPRGDSSYEHLVGS 1092
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere14g0421 1092 CDD STKc_IRAK 806 1077 - -
Dere14g0421 1092 Gene3D Ribonuclease Inhibitor 240 334 IPR032675 -
Dere14g0421 1092 Pfam Protein kinase domain 801 1071 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere14g0421 1092 Gene3D Ribonuclease Inhibitor 335 608 IPR032675 -
Dere14g0421 1092 Gene3D Ribonuclease Inhibitor 610 692 IPR032675 -
Dere14g0421 1092 Pfam Leucine rich repeat N-terminal domain 31 74 IPR013210 -
Dere14g0421 1092 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 238 332 - -
Dere14g0421 1092 ProSitePatterns Protein kinases ATP-binding region signature. 806 829 IPR017441 GO:0005524
Dere14g0421 1092 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 78 165 - -
Dere14g0421 1092 ProSitePatterns Serine/Threonine protein kinases active-site signature. 922 934 IPR008271 GO:0004672|GO:0006468
Dere14g0421 1092 ProSiteProfiles Protein kinase domain profile. 800 1078 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere14g0421 1092 SUPERFAMILY L domain-like 219 498 - -
Dere14g0421 1092 SUPERFAMILY RNI-like 77 305 - -
Dere14g0421 1092 SUPERFAMILY Protein kinase-like (PK-like) 782 1075 IPR011009 -
Dere14g0421 1092 SMART LRR_typ_2 364 388 IPR003591 -
Dere14g0421 1092 SMART LRR_typ_2 267 290 IPR003591 -
Dere14g0421 1092 SMART LRR_typ_2 291 315 IPR003591 -
Dere14g0421 1092 SMART LRR_typ_2 102 126 IPR003591 -
Dere14g0421 1092 SMART LRR_typ_2 631 654 IPR003591 -
Dere14g0421 1092 SMART LRR_typ_2 436 460 IPR003591 -
Dere14g0421 1092 SMART LRR_typ_2 412 435 IPR003591 -
Dere14g0421 1092 Pfam Leucine rich repeat 610 667 IPR001611 GO:0005515
Dere14g0421 1092 Pfam Leucine rich repeat 413 473 IPR001611 GO:0005515
Dere14g0421 1092 Gene3D Ribonuclease Inhibitor 29 171 IPR032675 -
Dere14g0421 1092 Gene3D Ribonuclease Inhibitor 172 239 IPR032675 -
Dere14g0421 1092 Pfam Leucine Rich Repeat 269 288 IPR001611 GO:0005515
Dere14g0421 1092 Pfam Leucine Rich Repeat 175 197 IPR001611 GO:0005515
Dere14g0421 1092 Gene3D Transferase(Phosphotransferase) domain 1 880 1082 - -
Dere14g0421 1092 Gene3D Phosphorylase Kinase; domain 1 767 879 - -
Dere14g0421 1092 Pfam Leucine Rich repeat 103 118 IPR001611 GO:0005515
Dere14g0421 1092 Pfam Leucine Rich repeat 243 259 IPR001611 GO:0005515
Dere14g0421 1092 SMART serkin_6 800 1076 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere14g0421 1092 SUPERFAMILY L domain-like 567 674 - -
Dere14g0421 1092 FunFam Putative LRR receptor-like serine/threonine-protein kinase 339 500 - -
Dere14g0421 1092 FunFam Leucine-rich repeat receptor protein kinase MSP1 763 879 - -
Dere14g0421 1092 PRINTS Leucine-rich repeat signature 105 118 - -
Dere14g0421 1092 PRINTS Leucine-rich repeat signature 412 425 - -
Dere14g0421 1092 FunFam Leucine-rich repeat receptor-like tyrosine-protein kinase PXC3 880 1082 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere14g0421 Dere-ChrDere14 4445540 4449013 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere14g0421 39 1074 Receptor kinase-like Gene Family AT4G39400 33.800 5.81e-153 485
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-Xb-2 Dere14g0421 Pkinase 1.1e-44 CL0016