Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere14g0416 ATGAAAGCCTTGCAGAGGTTGGTGCCTAATGCGAGTAAGACTGATAAAGCTTCAATACTAGACGAGGTGATTGAGTACTTAAAACAACTCCAAGCTCAGATACAAATGATGAGTATGAGAACCACGCCTCAACAGATGACGATGATGATGCCTTTAGCTATGCAGCAACAGCTTCAGATGTCTATGCTGGCCCGAATGGGCGTTGGAATGGGCTTGGGCATGGGTATGGGCATGCTTAACACCAACACCACCATGGCTCCACGTACACCTGCTCCTCCTTCTCTCCCACTGCCACAACTCACAGTTGGAGCTCCTGCTATTGCCCCTTCCTTCATCATGCCTCCATTGATTCAAGCCTATGCTCCTCCAAAGCCTGAGCCTGCATCTGCACCCACCACCAGTGCCTCAGTTTCTTTGGCTGATCCATATGCCACTATTCTCTCACAACCAGTTAATATGGATATTCTCAACAGCATGACTGCGCTTTACCAGCAACAGATCAGACAGAACAATCAGGCCGTGAACAGCAACAAGGGGACTGAGAAGAAATCAGAAATGAAAATGGAATATACTTGTGAGAATGGAAATTCATCAATGATGAGAAAAACAAATAATTGTATATACACCCAGCAACAATTTTAA 642 0.4548 MKALQRLVPNASKTDKASILDEVIEYLKQLQAQIQMMSMRTTPQQMTMMMPLAMQQQLQMSMLARMGVGMGLGMGMGMLNTNTTMAPRTPAPPSLPLPQLTVGAPAIAPSFIMPPLIQAYAPPKPEPASAPTTSASVSLADPYATILSQPVNMDILNSMTALYQQQIRQNNQAVNSNKGTEKKSEMKMEYTCENGNSSMMRKTNNCIYTQQQF 213
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere14g0416 213 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 1 30 IPR011598 GO:0046983
Dere14g0416 213 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 1 58 IPR036638 GO:0046983
Dere14g0416 213 Gene3D - 1 41 IPR036638 GO:0046983
Dere14g0416 213 PANTHER TRANSCRIPTION FACTOR PIF1-RELATED 1 175 IPR031066 -
Dere14g0416 213 Pfam Helix-loop-helix DNA-binding domain 2 31 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere14g0416 Dere-ChrDere14 4400103 4401519 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere14g0416 1 38 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G00050 84.211 1.46e-14 69.7
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Dere14g0416 HLH 2e-05 No_clan