Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Dere14g0383 | ATGTATTCGCCGGTTCGCATTTCAAGGATCGGAATGCACGCTAGACAATCTCCATACGCTTGCAGGGACACAGCGAAGCGAGGTAAGATTACAGCAATGGCTTTTCTTGGTAGAGTTGGGAATATACTAAGACAGGCTGCAAATAGGCAGCTCAGTTCAGAATTACGTTCAACTCCATCTATTTTTAAGGCTATACGGTGCATGTCATCTAGTGCAAGTTCGAAAGTGTTTGTGGGAGGATTGTCATATTCTACTGATGAGCAAAGCTTGAGGGAAGCTTTTGCAAAATATGGTGAAGTAGTTGATGCGAGGGTTATTATGGATCGTGACACTGGTAGATCTAGAGGCTTTGCCTTTGTTACATTCACTTCTGTTGAGGAGGCATCAAGTGCCATTCAGGCCTTGGATGGACAGGATCTTCATGGTCGCCGGGTTAGGGTGAATTATGCTAATGATAGGACTCGTGGATTTGGTGGTGGTGGTGCTGGTTTTGGTGGTTCTTATGGTAATGCTCCATATGGTGCTGGTTATGGAGGTGGTTATGGTAACCCTCCCTATGGTGGTTCTGGTGCATATGGTGGCAGTGCTAATGAAGGTTATGGTGGTGGTGGATATAGCGGAGGAAGCTATGGATCAGGTGGCAATTTTGGGGGCAGCACTGGCAATAACTATGCTTCTAACAGTTTTGGATCAGGAACTGCTGGTGGCAATTATGGTGGAAGTGGAATGAATTATGGGAATGATGGTAGTTTTGCAAGTGGAAGCACTTATGCTGGTGGAAGTAGTGGAGGATATGGTGGTAACAGTGGAAGTGAAGCTGCTGCTGACAGTTTTGGAACTGGAAGTGCCGGTGGCAGCTTTGGTGGAAGTGGAATGAGTGGAAGCACTTATGCTGGTGGAAGTAGTGGAGGATATGGTGGTAACAGTGGAAATGAAGCTGCTGCTGACAGTTTTGGAACTGGAAGTGCTGGTGGCAGCTTTGGTGGAAGTGGAATGAATTATGGAAATGATGGTAACTTTGCAAGTGGAAGCAATTATACTGGTGGCAGTAGTGGAGGCTATAGTGGCAACAATGGGAACTTTGGTGTTGCTGGTGGTGGTGGAGGTAGTGATAACTACGGAAGTGCTCCTAGTTTTGGTGCTGCTGCTGGTGGAGGTATTGATGGCTTTGGCAGTGCTGCTGGATTTGGAAGCAGTGATAACTCTGGCAGTTCAGCTGGTTTCGGTGGCAATACTGGTGTCGGTTTAGGCAGCACCTTTGCTGGTAATGATGGAAGTGGAGGACTCGAGTTTGGCAGCAGTGGTCAAGTGGAGAGCAAAGAAGGCGGCAATGTAGGCAATGTAGGTGAGGATGTCGGAGATTTTGGGGACTCGACGGAGGGAAACTACCGGGATGATGATGATGATACTGGTAATTTTGCCAAAAGGGCTTGA | 1434 | 0.4735 | MYSPVRISRIGMHARQSPYACRDTAKRGKITAMAFLGRVGNILRQAANRQLSSELRSTPSIFKAIRCMSSSASSKVFVGGLSYSTDEQSLREAFAKYGEVVDARVIMDRDTGRSRGFAFVTFTSVEEASSAIQALDGQDLHGRRVRVNYANDRTRGFGGGGAGFGGSYGNAPYGAGYGGGYGNPPYGGSGAYGGSANEGYGGGGYSGGSYGSGGNFGGSTGNNYASNSFGSGTAGGNYGGSGMNYGNDGSFASGSTYAGGSSGGYGGNSGSEAAADSFGTGSAGGSFGGSGMSGSTYAGGSSGGYGGNSGNEAAADSFGTGSAGGSFGGSGMNYGNDGNFASGSNYTGGSSGGYSGNNGNFGVAGGGGGSDNYGSAPSFGAAAGGGIDGFGSAAGFGSSDNSGSSAGFGGNTGVGLGSTFAGNDGSGGLEFGSSGQVESKEGGNVGNVGEDVGDFGDSTEGNYRDDDDDTGNFAKRA | 477 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Dere14g0383 | 477 | SMART | rrm1_1 | 75 | 148 | IPR000504 | GO:0003723 | |
Dere14g0383 | 477 | Gene3D | - | 44 | 169 | IPR012677 | - | |
Dere14g0383 | 477 | ProSiteProfiles | Eukaryotic RNA Recognition Motif (RRM) profile. | 74 | 152 | IPR000504 | GO:0003723 | |
Dere14g0383 | 477 | SUPERFAMILY | RNA-binding domain, RBD | 72 | 182 | IPR035979 | GO:0003676 | |
Dere14g0383 | 477 | PRINTS | Eggshell protein signature | 70 | 86 | - | - | |
Dere14g0383 | 477 | PRINTS | Eggshell protein signature | 229 | 239 | - | - | |
Dere14g0383 | 477 | PRINTS | Eggshell protein signature | 259 | 277 | - | - | |
Dere14g0383 | 477 | PRINTS | Eggshell protein signature | 200 | 215 | - | - | |
Dere14g0383 | 477 | MobiDBLite | consensus disorder prediction | 457 | 477 | - | - | |
Dere14g0383 | 477 | MobiDBLite | consensus disorder prediction | 425 | 477 | - | - | |
Dere14g0383 | 477 | PANTHER | HETEROGENEOUS NUCLEAR RIBONUCLEOPROTEIN 87F-RELATED | 60 | 231 | - | - | |
Dere14g0383 | 477 | Pfam | RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) | 76 | 146 | IPR000504 | GO:0003723 | |
Dere14g0383 | 477 | FunFam | Glycine-rich RNA-binding protein 3, mitochondrial | 44 | 181 | - | - | |
Dere14g0383 | 477 | CDD | RRM2_NsCP33_like | 75 | 150 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Dere14g0383 | Dere-ChrDere14 | 3958336 | 3961588 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Dere14g0383 | 74 | 172 | Eukaryotic Initiation Factors Gene Family | AT3G16380 | 36.275 | 2.11e-10 | 60.8 |