Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere14g0373 ATGATGAGTGAAGATTCAAGAGAAGGCTATTGCAAAGCCAAGCAAGAGAGAGCTACCATTACTATGGAAAAATTCTCCTCCAAATTACCCTCTTCTTCAAGACAATGGCCAGGTTTCAGAAATCCAAGAATCGTGCGAGTTTCGCAAAGTTTCGGAGGAAAAGATAGACATAGCAAGGTTTCCACCATAAGGGGACTAAGAGACAGAAGGATTAGGCTCTCAGTACCCACTGCAGTTCAGCTCTATGATCTTCAAGATAGGCTTGGACTAAGCCAACCTAGCAAGGTCATAGATTGGTTGCTTGAAGCCACAAAATATGATATTGACAAGCTCCCTCCCCTTCAAATGCCTCATGGTTTCCCTCAATTTCATCCGCAAACCCTACTTCCTCTTCATCATCATGAATCAACACTTTCCTTGCACTCTTCTCTTGAAAAAGGAAAGTGGGTCAAAGCAAGTGAAGAAGAAAATGGAGCTGGAATTAGTGAGGTTTCATTTCAGAAGCAATTTCCTTCTGGGGTTCAGTACTACAATGGCATGCCATATAATTATAACCCCTATCATTTGGAACCTGCGAGTCTATCTTTATCCCAATTTGGAAGCCATGGCTTAGTGTTTCCTTCACAGACAGAATATGCAAATATTCCAAGCAGTGGTGGCAATGGCGTGCAATTTTCATCTTGTTTGTCTGTTGTAGTACCTCCGCCATCTGGTTCTCAATTACTGTTTTACCCATCTTCTGCTGCAACACCTGCGTTTTTTGCTCCACATCAGATTGCCACCTCAGCAGAAGACAGTGATCCGAGAGGACAATTCAACAACCATGTTCAGTCGTTGAGCTCTTCAAGTTCTCATGTCATGCCTCCTCATTACCCTCACATTTCTTGTCTGAAAGCCCTTCCAGCACCATTTAGTTCCAGGCTTCTTGATCATTCGGATCGCAGTCAACCACATAAGGAAACAATCTATCAAGATGCTAAAGAATACTCAGCTGTGTGGAGTGATGGTGACTGCATGCAGGATGGGCAGTTTGCTGTTTTAGGATATAACATTGCATGCACGAGGCGTGCAGACGAGTACCTCTGGGCCTACAAAGGAAAATTTATGGGACTTGTGGTCCTATACATATCCTTTGTGTAA 1140 0.4333 MMSEDSREGYCKAKQERATITMEKFSSKLPSSSRQWPGFRNPRIVRVSQSFGGKDRHSKVSTIRGLRDRRIRLSVPTAVQLYDLQDRLGLSQPSKVIDWLLEATKYDIDKLPPLQMPHGFPQFHPQTLLPLHHHESTLSLHSSLEKGKWVKASEEENGAGISEVSFQKQFPSGVQYYNGMPYNYNPYHLEPASLSLSQFGSHGLVFPSQTEYANIPSSGGNGVQFSSCLSVVVPPPSGSQLLFYPSSAATPAFFAPHQIATSAEDSDPRGQFNNHVQSLSSSSSHVMPPHYPHISCLKALPAPFSSRLLDHSDRSQPHKETIYQDAKEYSAVWSDGDCMQDGQFAVLGYNIACTRRADEYLWAYKGKFMGLVVLYISFV 379
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere14g0373 379 Pfam TCP family transcription factor 53 151 IPR017887 -
Dere14g0373 379 ProSiteProfiles TCP domain profile. 53 111 IPR017887 -
Dere14g0373 379 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 19 246 IPR005333 GO:0003700
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere14g0373 Dere-ChrDere14 3820993 3824630 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere14g0373 39 254 TCP Transcription Factor Family AT5G60970 44.015 1.83e-50 171
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Dere14g0373 TCP 8.5e-25 No_clan