Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere14g0366 ATGATAGTAAGTATAATACCATCTTGCCGTGGTATTGCTGTATTGCTGGCTGAGTTAAGGATGCAGGAGTCGAGAAGTGAAAGAGCTCCTCTCCTGGAGCGCGGAGAAGGTGGAAAGAGAGATGTTGCCTCATCTGGTCAGCTGTCAGACCTTGAACATGGCGATGCACTACCGGCTGCAAATGTGGGATTCTGTCGGGTGCTATCACTAGCAAAGCCTGAAGCTGGGAAGTTGATACTTGCAACATTGGCTCTGTTGGTTGCATCCACATCAAATATCTTAATTCCAAAATTTGGTGGGAAGATAATTGACATTGTCTCAGGAGATATTTCAACTCCTGAAGAGAAAGCTAAAGCTCTGGATGCTGTCAAGAACACCATAGTATCAATCTTTCTGATTGTTGTTGTTGGTTCAGTTTGCGCAGCACTTCGAGCATGGCTTTTTTCTTCTGCTAGTGAAAGGGTTGTTGCTCGGCTGAGAAAAAGGTTGTTTAGTCACCTCATACATCAGGAGATAGCCTTCTTCGATGTTACTCGAACTGGAGAACTTCTAAGTAGGCTATCTGAAGATACACAGATCATAAAAAATGCTGCAACTACCAATCTTTCTGAGGCCCTGAGAAACTTATCAACTGCATTTATTGGTCTATCCTTCATGTTTGCAACATCATGGAAGTTAACTTTGTTGTCTTTGGCTGTTGTGCCTGCTATTTCTGTTGCTGTTCGTAAATTTGGCCGGTTCCTGCGTGAACTGTCCCATAAAACTCAAGCTGCAGCTGCAGTAGCTTCTTCTATTGCCGAGGAATCCTTTGGTGCTGTAAGAACAGTAAGATCTTTTGCCCAAGAAGAGTACGAAATAGCACGATATTCTGAGAAAGTTGATGAAACACTTAAGCTTGGTCTTAAACAGGCTAGAGTGGTTGGACTTTTTTCCGGAGGCCTTAATGCAGCGTCTACGCTGTCAGTTATTGCAGTTGTTATATATGGAGCTAATTTGACAATCATGGGTTCCATGTCACCCGGTGATCTAACATCTTTCATTCTCTATAGTCTCACAGTGGGTTCTGCTGTATCTGGTCTGTCATCATTGTATACAGTAGCAATGAAAGCTGCAGGCGCTAGCAGACGGGTATTTCAACTTCTGGATCGAGTCTCTTCCATGCCCAAGTCAGGAAATAAGTGTCCTCTGGGTGATCAAGATGGGGAAGTGGAACTAGATGATGTTTGGTTTGCCTATCCATCACGTCCCAGTCATATGATACTCAAGGGAATTACACTGAAACTGAAGCCTAGTTCAAAGGTTGCTCTTGTTGGTCCCAGTGGTGGCGGAAAGACTACTATTGCAAACTTAATTGAAAGGTTTTATGACCCAACCAAAGGAAAGATTCTGCTGAATGGAGTTCCTCTGGTAGAAATATCACATGAGCATCTACACAGAAAGATAAGTATAGTGAGTCAGGAGCCTATCCTTTTCAACTGTTCCATAGAGGAGAACATAGCATATGGATTTGATGGCAAAGTTAATCATTCTGCTATAGAAAATGCGGCTAAAATGGCCAATGCACATGAATTTATATCAAAGTTCCCAGATAAATACCAGACTTATGTTGGAGAACGTGGGGTACGGCTTTCAGGAGGACAGAAGCAGAGAATAGCTATTGCTAGAGCTCTGCTTATGGACCCAAAAATTCTTCTCTTGGATGAAGCCACTAGTGCCCTGGATGCTGAAAGCGAATACCTAGTCCAAGATGCCATGGATTCTCTCATGAAGGGAAGGACGGTTCTAGTTATTGCTCATAGGCTATCAACGGTTAAAAGTGCTAATATTGTAGCAGTTGTTTCTGATGGCCAAATAGTTGAAAGTGGCACCCATGATGAGCTTCTCAGCAAGAATGGTGTTTATACTGCATTAGTCAGGAGACAATTACAAACAGCAAAAACTGAAATCTAG 1950 0.4277 MIVSIIPSCRGIAVLLAELRMQESRSERAPLLERGEGGKRDVASSGQLSDLEHGDALPAANVGFCRVLSLAKPEAGKLILATLALLVASTSNILIPKFGGKIIDIVSGDISTPEEKAKALDAVKNTIVSIFLIVVVGSVCAALRAWLFSSASERVVARLRKRLFSHLIHQEIAFFDVTRTGELLSRLSEDTQIIKNAATTNLSEALRNLSTAFIGLSFMFATSWKLTLLSLAVVPAISVAVRKFGRFLRELSHKTQAAAAVASSIAEESFGAVRTVRSFAQEEYEIARYSEKVDETLKLGLKQARVVGLFSGGLNAASTLSVIAVVIYGANLTIMGSMSPGDLTSFILYSLTVGSAVSGLSSLYTVAMKAAGASRRVFQLLDRVSSMPKSGNKCPLGDQDGEVELDDVWFAYPSRPSHMILKGITLKLKPSSKVALVGPSGGGKTTIANLIERFYDPTKGKILLNGVPLVEISHEHLHRKISIVSQEPILFNCSIEENIAYGFDGKVNHSAIENAAKMANAHEFISKFPDKYQTYVGERGVRLSGGQKQRIAIARALLMDPKILLLDEATSALDAESEYLVQDAMDSLMKGRTVLVIAHRLSTVKSANIVAVVSDGQIVESGTHDELLSKNGVYTALVRRQLQTAKTEI 649
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere14g0366 649 FunFam ABC transporter B family member 25 130 400 - -
Dere14g0366 649 Pfam ABC transporter transmembrane region 78 353 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Dere14g0366 649 PIRSF ABC_prm/ATPase_B 12 649 - -
Dere14g0366 649 Gene3D ABC transporter type 1, transmembrane domain 129 400 IPR036640 GO:0005524|GO:0016020
Dere14g0366 649 FunFam ABC transporter B family member 25 401 643 - -
Dere14g0366 649 ProSitePatterns ABC transporters family signature. 543 557 IPR017871 GO:0005524|GO:0016887
Dere14g0366 649 Pfam ABC transporter 421 571 IPR003439 GO:0005524
Dere14g0366 649 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 394 641 IPR027417 -
Dere14g0366 649 CDD ABC_6TM_AtABCB27_like 81 377 - -
Dere14g0366 649 SMART AAA_5 430 624 IPR003593 GO:0016887
Dere14g0366 649 MobiDBLite consensus disorder prediction 27 46 - -
Dere14g0366 649 Gene3D - 401 645 IPR027417 -
Dere14g0366 649 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 403 640 IPR003439 GO:0005524
Dere14g0366 649 CDD ABC_MTABC3_MDL1_MDL2 403 641 - -
Dere14g0366 649 SUPERFAMILY ABC transporter transmembrane region 66 382 IPR036640 GO:0005524|GO:0016020
Dere14g0366 649 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 79 369 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Dere14g0366 649 PANTHER ATP-DEPENDENT PERMEASE MDL1, MITOCHONDRIAL 61 646 IPR039421 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere14g0366 Dere-ChrDere14 3735295 3740998 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere14g0366 131 641 Calmodulin-binding Proteins AT2G36910 39.539 8.68e-102 335