Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere14g0362 ATGGAGTCATGGAGTTATGTCTCTGAAGAAAAAGGGTTTGTGTCCAACGAGACACTCGCATCTCCTAATTCACTTTCACGGACCAAAGGTTCCGTCTTGGGATGGGAATTGAAAACCCCATCTAGCTTTTCCAACGGCATCTCATCCTCGGGTGAACAAAACATAGGAAATCAAGGTTTTGAGGAAATGGGTTTTCCAGAAATGTTGGGGAAACAATTGTCCAATGATCCAATTAGTAGTGTTCCGAGCAGAAAGCTCCAAGGTGGTCCCTTTATGGCTGCCTCAAATGCGATTTCCGGAGGAGAGGACTCCAATTCGAAGCTTTCGCACTCTGTGGTTGAATCTAACGGTCGGGAATCGCTCATTGATTTGAAGCTGGGGCGATTTGGTGATCCCAGAGATGCCATGGATTCGACATTTACCAAAGGAACCCCTATCTTGTCTTCCTCCGAGTCATCGGCACCGACCAAGAGAATACGAGGTTCGGGGGTTCATTTACAAACTGCGTACTGTCAAGTCTATGGATGTAATAAGGATCTGAGCGCCTCTAAAGACTACCACAAGAGGCATAAAGTTTGCGAGGTTCACTCCAAGACTTCCAAAGTTATAGTGAACGGCATCGAACAGAGATTTTGTCAGCAATGCAGTAGGTTTCATTTGTTGGCTGAATTTGATGATGGTAAGCGCAGCTGTCGCAAACGCCTTGCAGGTCATAACGAGCGTCGAAGAAAGCCACAAGTGGGCATTCACTCTGGAAAGGCCGGAAGACTGCTTCAGCCATATGGTGAGAGCAGATACCAGGGGACCATGCTAACAACTGCATCTTTTATCTGCCAAGAGATACTCCCTACTGGGGTTTTGGGTTCTGATAAATATGGAACAAATGATTGGTGGAGGCCTATAAAGGCCGAAGATGGCACTCATTATAGGCATCTGCCTGCTGTTCCTATCACAAATGGGCAACCTCAGTCAAGATCTCTATTCCCTTCGTATAACGAAAGACAGTTTCCTTTTCTTCACGAAAATGGCACTACATCAACTACTGGAAGCATCTTCTGTGAGAACAACAGTCAGTATCCTCCTCCTTCCATGGTACCAAATTCTGGGGCACAATCCCTATTCCAAGGCACCTCCTTAAGAAGTGAGGACTTCCAAGGTTATGATACAGCTTCGACTATTCAAGGACTATCGGGAGTTTCAGACTCTGGCTGTGCTCTCTCTCTTCTGTCATCTCAATCCCAGAGCTCCTCAAGCCATTCATCAGGAATTCCCATGGCTCGCCCCCTGGTTATTCCAAGCAGCAGCCAGTGTCATTACAGCCAGAGTCAGCTCACAGAAAAGATCATAGGAATAAGCTCACAGGCTTCTATGAGTGGAGTGTCCAACAGGTTTCAATCAGAGATGAATCCTGCTGCTGATGGAAGCAATCTTAGTCCTGTACTGATATCAGACAATAGTAACATTCTCCATTTTGAAATGGCAGATGGGATATTCCAAGGGCCAGATTTTGTGAATGTGAAAGATGCTCCAGCGAGTTGA 1539 0.4613 MESWSYVSEEKGFVSNETLASPNSLSRTKGSVLGWELKTPSSFSNGISSSGEQNIGNQGFEEMGFPEMLGKQLSNDPISSVPSRKLQGGPFMAASNAISGGEDSNSKLSHSVVESNGRESLIDLKLGRFGDPRDAMDSTFTKGTPILSSSESSAPTKRIRGSGVHLQTAYCQVYGCNKDLSASKDYHKRHKVCEVHSKTSKVIVNGIEQRFCQQCSRFHLLAEFDDGKRSCRKRLAGHNERRRKPQVGIHSGKAGRLLQPYGESRYQGTMLTTASFICQEILPTGVLGSDKYGTNDWWRPIKAEDGTHYRHLPAVPITNGQPQSRSLFPSYNERQFPFLHENGTTSTTGSIFCENNSQYPPPSMVPNSGAQSLFQGTSLRSEDFQGYDTASTIQGLSGVSDSGCALSLLSSQSQSSSSHSSGIPMARPLVIPSSSQCHYSQSQLTEKIIGISSQASMSGVSNRFQSEMNPAADGSNLSPVLISDNSNILHFEMADGIFQGPDFVNVKDAPAS 512
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere14g0362 512 FunFam Squamosa promoter-binding-like protein 14 162 232 - -
Dere14g0362 512 SUPERFAMILY SBT domain 169 249 IPR036893 GO:0003677|GO:0005634
Dere14g0362 512 Gene3D - 162 232 IPR036893 GO:0003677|GO:0005634
Dere14g0362 512 ProSiteProfiles Zinc finger SBP-type profile. 168 245 IPR004333 GO:0003677
Dere14g0362 512 Pfam SBP domain 171 244 IPR004333 GO:0003677
Dere14g0362 512 PANTHER SQUAMOSA PROMOTER-BINDING-LIKE PROTEIN 4 80 486 IPR044817 GO:0003677
Dere14g0362 512 MobiDBLite consensus disorder prediction 141 157 - -
Dere14g0362 512 MobiDBLite consensus disorder prediction 137 158 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere14g0362 Dere-ChrDere14 3708164 3711174 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere14g0362 122 287 SBP-box Gene Family AT1G69170 53.614 8.76e-51 177
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF SBP Dere14g0362 SBP 1.4e-31 No_clan