Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere14g0349 ATGGAGCTCCCTCAAGCGCGTCCTTTTGGAACCGAAGGAAGAAAACCGACGCATGACTTTCTGTCACTGTACAGTCATTCAACTATCCCTCAAGATCCGAGGCCACCTTCTCAAGGAAGTTACCTCAGAACCCATGATTTCTTGCAGCCACTAGAACGGGTAGAGAGGAAACCAAGTGCCAAGGAAGAAGCATCAGATGAAACATCATCAGTGGTTCAAAATCTACCGCCTCCTGCACCACCCCCATCTGTTGAGCACATCCTACCTGGAGGCATTGGGACTTACAGTATTAGCCACATTGCCTATTATGGTAATCACAAAGTTCCAAAGCCGGAGGCATCCCTTTTCACTGTGGCTCCTCATGAACCTAATACGGATAGAAATGAGGAGAACTCTAACTGTAGTTCATATACTGGAAGTGGTTTCACTTTGTGGGAGGAGTCTGTGGTTAAGGGAAAGACAGGGAAGGAGAACGATATGGGAGATAAACCCTTTATAGGAGAGTCTGCGGCAAAGCCAGGGCAGTGGACGCTGGCAGAGAGAGCATCTCACTCGTTTGCCAACAATCACCACAATAGCTTCAACCCTACCGCCTCCTCTCAGAAAACTGGGCAGAAGAACAAGAGTCTTATGGATATGATAAAATCGGCCAAGGATTGCGCTCAGGATGAGGAGCTAGGCAATGAAGAAGCATTTATTTTTAAGAAAGAATCCTCATATACCCAAAGAGGAGAATTAAGAGTTAAAGTGGATGGGAAGAGCTCCGATCAAAGGCCAAACACACCACGATCAAAACATTCTGCAACAGAACAGCGTAGAAGGAGCAAAATAAATGACAGATTCCAGATGTTGAGAGAGCTTATTCCGCATAGCGACCAGAAAAGAGATAAGGCATCATTTTTGTTAGAGGTCATTGAATATATACAATTTTTACAAGAAAAGGTGCATAAGTACGAAGGTTCATACCAAGTGTGGAATTCAGAGAAAGAAAAATTGACTCCATTGAGAAATAATCACAGGCATTCAGAAAGCTATGATGATCAATCTCGTGGCATAAATGGTGGGTCAGTTCCTTCACCAACATTACTGTTTGCTTCAAAGACTGATGAGAAAAATTTTAGCGTCTCCCCAATGATTACTGGGAGCACTCAGAATGTAGAAGCTGGCGCAAGCACAGCAACTACATTGAAGACAATGGATCAACATCCTGGAATAACCAATAAGGCCCTGCCAATTCTTAACTCTTCACAGCCAAATTTCTTCAATCCTGGCCAAAGTGGTGGTTCGGGTGGAGTGGTGTCTCAGCTCACACACAGGATGGCCTCAGATTCTGAAAACACCATCTATAAAGCCTCAGGGCAATCTCAGACTTCCTCTTGTGCAACAGATGTGACTGCTGCTACTGATAAGCTGAAAGAAAAAGAGCTCACCGTTGAAGGTGGTGCCATTAGCATATCAAGTGTGTACTCAAAAGGGTTGTTGGATTCACTAACACAAGCATTGAAGCGTTCGGGAGTGGATTTGTCCCAGGCTAGCATTTCAGTGCAAATTGAACTTGGAAAGCAGGCAAAAATCAAACCAATAGTACCAACATCTGGTGCTAAGGATGAAGCTCCTTCTTGCATTCGAGGGATGAAGCGCTCCAGAGTTGCTAGCGTAGAGGAGTCTGACCTAGCAATGATGAAGCTAAAGACATGCAGAAGTTGA 1707 0.4458 MELPQARPFGTEGRKPTHDFLSLYSHSTIPQDPRPPSQGSYLRTHDFLQPLERVERKPSAKEEASDETSSVVQNLPPPAPPPSVEHILPGGIGTYSISHIAYYGNHKVPKPEASLFTVAPHEPNTDRNEENSNCSSYTGSGFTLWEESVVKGKTGKENDMGDKPFIGESAAKPGQWTLAERASHSFANNHHNSFNPTASSQKTGQKNKSLMDMIKSAKDCAQDEELGNEEAFIFKKESSYTQRGELRVKVDGKSSDQRPNTPRSKHSATEQRRRSKINDRFQMLRELIPHSDQKRDKASFLLEVIEYIQFLQEKVHKYEGSYQVWNSEKEKLTPLRNNHRHSESYDDQSRGINGGSVPSPTLLFASKTDEKNFSVSPMITGSTQNVEAGASTATTLKTMDQHPGITNKALPILNSSQPNFFNPGQSGGSGGVVSQLTHRMASDSENTIYKASGQSQTSSCATDVTAATDKLKEKELTVEGGAISISSVYSKGLLDSLTQALKRSGVDLSQASISVQIELGKQAKIKPIVPTSGAKDEAPSCIRGMKRSRVASVEESDLAMMKLKTCRS 568
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere14g0349 568 FunFam BHLH domain class transcription factor 259 331 - -
Dere14g0349 568 CDD bHLH_AtBIM_like 260 336 - -
Dere14g0349 568 MobiDBLite consensus disorder prediction 245 278 - -
Dere14g0349 568 PANTHER BES1-INTERACTING MYC-LIKE PROTEIN 11 565 IPR044295 GO:0003700|GO:0006351|GO:0046983
Dere14g0349 568 MobiDBLite consensus disorder prediction 21 44 - -
Dere14g0349 568 MobiDBLite consensus disorder prediction 348 362 - -
Dere14g0349 568 MobiDBLite consensus disorder prediction 336 362 - -
Dere14g0349 568 MobiDBLite consensus disorder prediction 1 83 - -
Dere14g0349 568 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 261 311 IPR011598 GO:0046983
Dere14g0349 568 SMART finulus 267 317 IPR011598 GO:0046983
Dere14g0349 568 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 259 329 IPR036638 GO:0046983
Dere14g0349 568 Gene3D - 259 335 IPR036638 GO:0046983
Dere14g0349 568 Pfam Helix-loop-helix DNA-binding domain 263 312 IPR011598 GO:0046983
Dere14g0349 568 MobiDBLite consensus disorder prediction 48 64 - -
Dere14g0349 568 MobiDBLite consensus disorder prediction 187 208 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere14g0349 Dere-ChrDere14 3573654 3579515 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere14g0349 1 523 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G08130 48.452 4.36e-120 363
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Dere14g0349 HLH 2.6e-15 No_clan