Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere14g0342 ATGACCAGCCCAGTAGATCAAGAGAGGGGGCAGCTTCTGATGAAGAGGAGAAAATACACGAACGCGGAAGCATCGAGAAATCCGAGGCGAATGAGATTCTGCAGCAGCAGCAAGAACGAAGGCGGAGGGGTGTCGACGACGCTGAAGCTGTACGAAGACCCATGGAAGATCAAGAAGACCCTGACGGAAAGCGATCTAGGAATCTCGAGCCGTCTGTTGCTGGCGACAGATGTGGTGAAGAGCCAGATCTTGCCTATGCTGGGGCTGGATCATGCACGAGCCGCCGACACCGATGAAGGCACCACCTTAAGGGTTTGGGACTTGGATTCCAAATCCATGCACTACCTCATCCTCAAGCGATGGTCTTCGTCCAAGAGCTATGTCTTCATAGGGAAGTGGAACCAGGATTTTGTCAAAAGGAGGGAGTTGAAGAAAGGGGACGAGATTGGGTTCCAGTGGGATCCTTATAACACCCTCTTCAACTTCTGCGTTCTCAAACGTGCCTCGACGCCCATATGA 519 0.5241 MTSPVDQERGQLLMKRRKYTNAEASRNPRRMRFCSSSKNEGGGVSTTLKLYEDPWKIKKTLTESDLGISSRLLLATDVVKSQILPMLGLDHARAADTDEGTTLRVWDLDSKSMHYLILKRWSSSKSYVFIGKWNQDFVKRRELKKGDEIGFQWDPYNTLFNFCVLKRASTPI 172
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere14g0342 172 MobiDBLite consensus disorder prediction 1 26 - -
Dere14g0342 172 PANTHER TRANSCRIPTION FACTOR B3-DOMAIN FAMILY-RELATED 28 169 - -
Dere14g0342 172 SUPERFAMILY DNA-binding pseudobarrel domain 54 166 IPR015300 -
Dere14g0342 172 CDD B3_DNA 55 166 IPR003340 GO:0003677
Dere14g0342 172 Gene3D - 53 169 IPR015300 -
Dere14g0342 172 MobiDBLite consensus disorder prediction 10 25 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere14g0342 Dere-ChrDere14 3522675 3523193 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere14g0342 59 157 RAV Transcription Factor Family AT3G61970 32.323 4.80e-06 43.5