Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere14g0341 ATGAGGGCGCTCAGATTAATCGAAGGGTGCATGTTATGTTACTACAAATCTGCAGTAAAGGCTTGGCACTGGCGGAGATATGCTTCCAGTGAATATTGGGTGGCTATTAAGTCGGCGAGAAAGACGAGTTTAGAAGTGAAAAATATCGAAGGAGGCATCGTAATTACAACTTTGGGACAAGTACCTGAGCAACACTCAAGTGACGGGAATTTGCATTATGCCATGGTCCAACGCGCCAGAACGCTGAAAATGGACTATGGCGATGGCTATTCCAGCAAGTGGGTTCGTCTCTGTGACAATTGCAGGTTGTCTGCTTCCACCCTTTACTGCCACACCGATTCAGCATATCTCTGTTCTTCCTGCGACGGACAAATTCATGCTGGGTCTCCTTGTTGGCCCCGCTATCGCGTGCAAATTTGCTGCGCGTGTGAGAACGCTCCGGCAGCTTTCACCTGCAAGGCCGATAATGCTTCACTGTGCATCAACTGTGACTTCGAAATTCACTCTGCGAACCCAATCGCTAGCCGACACAACAGGGCACCCGTGTCCTCCCTGTCTCATGTACTAAACGACACCGTAATAGCTACAGACGACCAGCCTAATCATGAGGTTGTCGATAACAACAACAAAAATAGCAAGGAAATGGACGAACTAGAAGCTGATTCATGGTTGTTGCTCGATTCTGACACTATAGACAGCCAGGTTGACGATGGGCATATGTTTGGAAAAGCAGAGAATGATCATCACGCGCACGTGGGGGTTGTTTTGGAGTGTGATTCATCCACCAAGTTTCATAATTTCCAGGAAGATCAAGATCAGGAGCAGCAAGCTTACAGCTTTTCGGAAGAGATGAACGAAAGTGACAGTGTGGTGCCAATTCAATCGGCTGAAGCGCAGCCTAAGCAATTGCAGCCACAACAGCAGCAGAATATCTACTTCAATATGGAACACGAACCATCAAGATTGGCTTTCGCTAATTACACATCGACTTGCCAGAACGTGGCTGTGCCATTTATGGATGCTCAAGTGTTAGCAAGAGGGACGATAAGTGACGTATCAGGCTATAGGTTTGCCAAAGGAGTAGAGATATTTCCAAATCCTTCAATTTCAATGCAGATCCACTTTGGGCAGATGAACAGGAAAGCTGGTGTGGAGAAATACAGAGAGAAGAAGAAATCAAGGAAGTTCGAGAAGAGAATAAGATATGCCTACAGGAAGGCCTACGCTGAGAAACGACCCAGAGTTAAGGGCAGATTTGCAAAGCGAGAAGACTTAACCTCGCATGGACCTCTTCCTCTCAATTGA 1305 0.4674 MRALRLIEGCMLCYYKSAVKAWHWRRYASSEYWVAIKSARKTSLEVKNIEGGIVITTLGQVPEQHSSDGNLHYAMVQRARTLKMDYGDGYSSKWVRLCDNCRLSASTLYCHTDSAYLCSSCDGQIHAGSPCWPRYRVQICCACENAPAAFTCKADNASLCINCDFEIHSANPIASRHNRAPVSSLSHVLNDTVIATDDQPNHEVVDNNNKNSKEMDELEADSWLLLDSDTIDSQVDDGHMFGKAENDHHAHVGVVLECDSSTKFHNFQEDQDQEQQAYSFSEEMNESDSVVPIQSAEAQPKQLQPQQQQNIYFNMEHEPSRLAFANYTSTCQNVAVPFMDAQVLARGTISDVSGYRFAKGVEIFPNPSISMQIHFGQMNRKAGVEKYREKKKSRKFEKRIRYAYRKAYAEKRPRVKGRFAKREDLTSHGPLPLN 434
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere14g0341 434 MobiDBLite consensus disorder prediction 281 305 - -
Dere14g0341 434 CDD Bbox1_BBX-like 97 130 - -
Dere14g0341 434 CDD Bbox1_BBX-like 139 182 - -
Dere14g0341 434 ProSiteProfiles CCT domain profile. 380 422 IPR010402 GO:0005515
Dere14g0341 434 Pfam CCT motif 380 422 IPR010402 GO:0005515
Dere14g0341 434 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 4 98 424 IPR045281 GO:0009909
Dere14g0341 434 ProSiteProfiles Zinc finger B-box type profile. 135 182 IPR000315 GO:0008270
Dere14g0341 434 Pfam B-box zinc finger 138 181 IPR000315 GO:0008270
Dere14g0341 434 Coils Coil 201 221 - -
Dere14g0341 434 ProSiteProfiles Zinc finger B-box type profile. 93 126 IPR000315 GO:0008270
Dere14g0341 434 SMART bboxneu5 93 130 IPR000315 GO:0008270
Dere14g0341 434 SMART bboxneu5 135 182 IPR000315 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere14g0341 Dere-ChrDere14 3511484 3514254 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere14g0341 91 422 C2C2-CO-like Transcription Factor Family AT3G02380 39.528 6.35e-63 205
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-CO-like Dere14g0341 zf-B_box 9.8e-06 No_clan