Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere14g0339 ATGGGGTGCTCGTTTTCTGGGTTGAATGCTCTATACGACGCCGTTAACGGAGGAGGGGATGTGTGGATCAATGAGAATCGATTCCGCATCGTCAGGCAGCTTGGGGAAGGTGGGTTCGCCTTTGTCTACTTAATCAAGGAAGTGGTCACTGACTCCTCCGCCGCCTCTGCTGGCAGTGGTCTCGCTAAGAAGCTCAAAGACTCCTCTCATGTCTCTGACGATGGAACTTATGCAATGAAAAAGGTCCTCATTCAGAACAGCGAACAGTTGGACTTGGTGAGGGAGGAGATACGTGTGTCATCATTGTTCAATCATCCAAATCTGCTCCCACTTCTTGATCATGCAATCATTTCTGTTAAGCCTACCCAAGAAACATCTTGGAACCATGAAGCATACTTGTTATTTCCAGTTCATTTGGATGGAACATTGCTAGACAATGCAAAAACAATGAAAGCCAAGAAGGAGTTCTATTCTACCTCTGATGTTCTTCAAATATTTCAGCAGCTTTGTGCAGGACTCAAGCATATGCACAGTTTGGATCCTCCATATGCACATAATGATGTCAAACCTGGAAATGTCCTCATAACGCATAGAAAAGGGCAACCACCTCTTGCCATACTGATGGATTTTGGCAGTGCTCGACCTGCCAGGAGGCAAATTCGCTCCCGATCAGAGGCACTACAGCTGCAGGAATGGGCAGCTGAACATTGCTCTGCTCCCTTCCGTGCTCCTGAGCTTTGGGATTGCCCAAGCCATGTTGATATAGATGAAAGGACTGATATTTGGTCACTAGGATGCACATTGTATGCGATAATGTATGGCGTATCTCCATTTGAATATGTACTTGGAGAATCTGGAGGAAGCCTACAATTGGCCATTATAAATGCTCAGGTCAAATGGCCAGCTGGACCGAAGCCCCCATATCCAGAAGCTCTTCATCAGTTCGTGACGTGGATGCTTCAGCCCCAGACTGCCATGCGGCCCCAGATAAATGATATCATTATCCATGTTGATAAGTTGATTGCAAAGTTCTCTCCTTGA 1041 0.464 MGCSFSGLNALYDAVNGGGDVWINENRFRIVRQLGEGGFAFVYLIKEVVTDSSAASAGSGLAKKLKDSSHVSDDGTYAMKKVLIQNSEQLDLVREEIRVSSLFNHPNLLPLLDHAIISVKPTQETSWNHEAYLLFPVHLDGTLLDNAKTMKAKKEFYSTSDVLQIFQQLCAGLKHMHSLDPPYAHNDVKPGNVLITHRKGQPPLAILMDFGSARPARRQIRSRSEALQLQEWAAEHCSAPFRAPELWDCPSHVDIDERTDIWSLGCTLYAIMYGVSPFEYVLGESGGSLQLAIINAQVKWPAGPKPPYPEALHQFVTWMLQPQTAMRPQINDIIIHVDKLIAKFSP 346
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere14g0339 346 Pfam Protein kinase domain 58 336 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere14g0339 346 Gene3D Transferase(Phosphotransferase) domain 1 16 345 - -
Dere14g0339 346 ProSitePatterns Serine/Threonine protein kinases active-site signature. 183 195 IPR008271 GO:0004672|GO:0006468
Dere14g0339 346 ProSitePatterns Protein kinases ATP-binding region signature. 34 64 IPR017441 GO:0005524
Dere14g0339 346 CDD STKc_16 27 342 - -
Dere14g0339 346 SMART serkin_6 28 341 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere14g0339 346 PANTHER SERINE/THREONINE-PROTEIN KINASE 16 3 344 - -
Dere14g0339 346 SUPERFAMILY Protein kinase-like (PK-like) 20 336 IPR011009 -
Dere14g0339 346 ProSiteProfiles Protein kinase domain profile. 28 341 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere14g0339 Dere-ChrDere14 3490990 3495712 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere14g0339 33 336 EF-hand Containing Proteins AT4G04710 24.272 2.59e-13 68.9
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK NAK Dere14g0339 Pkinase 2e-29 CL0016