Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere14g0338 ATGACAAAGGGCGTCAAGCCGTCAACTGAAGAGGACCTAAGCAATTCTTTATTTTCTTCGTTAAGCCGTACCTCCAGTTTTAATTACATAGCTGTTAATTCTAGTCTTGACTTTGCAGCACAGCTTGATAATTCCAGGGGGTTTTGTCCTTTTCTGCAGGTTTTAGTGTGGCCATCCTTAGTTTCCTTAATGGCGCAAGATACTGCTTCTGGTGCTGAAATGCCTCAGAGACCTTCTGGTTTACTGCGAGATCAGATTCAACTAGTAAAAAGAAAGGACCTTGATCGCTACGAAATTGTCTCAATCCCAGATTCTCTGTCATTTGAGAAAGGTTTCTTCATAGTTATTCGTGCATGTCAAGTGCTGGCTCAAAAGAATGATGGGATAATATTAGTAGGAGTGGCTGGACCCTCTGGAGCAGGGAAGACTGTTTTCACAGAGAAGGTCCTCAATTTTTTGCCAAGCATTGCTGTCATAACAATGGACAACTATAACGATTCTAGTCGAGTGATAGATGGCAACTTTGACGACCCTCGGTTGACAGATTATGATACCTTGCTGGAAAATATACAGGGTCTTAAAGCAGGGAAGCCAGTTCAAGTTCCAATATATGATTTCAAGTCTAGCTCTTGCATAGGCTACAGGACTGTTGAAGTCCCTAGCTCCCGCATCGTCATCATAGAAGGCATCTATGCCTTAAGTGAACGATTACGTCCTTTGCTAGATCTTCGTGTGTCTGTTACTGGTGGAGTTCACTTTGACCTTGTCAAGCGAGTTTTGCGGGATATTCAACGTGCCGGTCAAGAGCCTGAAGAAATAATTCAACAAATTTCTGAAACGGTATATCCTATGTATAAGGCTTTTATTGAGCCAGATCTCCAAACAGCACATGTAAAAATCATAAACAAGTTTAATCCATTCTCTGGATTCCAGAATCCCACCTACATATTAAAGTCAACAAGGGCTGTGACAGAGGACCAAATCAAGGCTGTTATCTCTGCTGAGCATACTGAAACCACCGAGGAAACATATGACATATATCTTCTACCACCTGGAGAAGATCCTGAAGCATGTCAATCATACTTGAGGATGAGAAACCGGGATGGAAAGTACAATCTTATGTTTGAGGAGTGGGTTACAGACAGTCCATTCATAATATCTCCTAGAATTACTTTTGAGGTCAGTGTACGCCTTCTTGGAGGGCTGATGGCCTTGGGGTACACAATTGCAGCTATCCTGAAAAGAAACAGCCATGTCTTCCATGATGATAAAGTGTCTGTAAAAACTGATTGGTTAGAACAGCTTAATCGCTTATATGTTCAGGTGCAAGGAAAAGATAGAAACTATGTTAAATATGTGGCAGAGAAACTGGAGTTGGATGGTTCATATGTTCCTCGTACTTACATTGAGCAAATTCAGCTAGAAAAGCTTATAAACGATGTGATGGCACTGCCAGATGATCTGAAGACAAAACTCAGTATAGACGATGATTTGGTTTTGAGCCCCAAAGAAGCCCTTTCCAGAGCTTCAGCAGATAGGAGAATGAAGTATCTTAATCGCAATATTTCACACTCATACTCAAATCAAAGAGACAAGAGTCTATCTAAGTTGACTAGATTAGCTATAAATAACAGAAGATTTGATGGACGAGCTCTAGAGTCACCTGCAGCAATTGCAAACCAAGGGGTCATTACTCAACTGTCTGAACAGATTTCTACACTAAATGAGAGAATGGATGAGTTCACATCCCGTATTGAAGAGCTGAATCCAAAGTTTGCAAATAGAAAAGTTTCAGCCAGTCAGCAAAACTTGGCTTTACAGGCTGAAGCGTGCAATGGCTCAGGACCCACTTCTCTCTTCCTTACAGGGTTGGGTAATGGTTCATTGACTGGATCGATGTTGCCTAATTCTTCATCATCTTCCCAGTTGGTGAGAGAGTCCCCATTGATGGAAGAGCTTTTACTTATTGCACGAGGACAACGTCAAGTCATGCATCAACTAGACACTCTGAGTAATCTTTTGCATGAATACTGCGGTGAGAGAGCACGTCTAGGAAGAACAGACCGGACAAGCAGGATTCCTGATGTTGACTTCACAATCCCGCTTGTGCTGACTTTGGCAATTGGTGCTGTTGGTGTCTTTCTGTTCAAGGGTTTCACATCACAAAATTAA 2172 0.4185 MTKGVKPSTEEDLSNSLFSSLSRTSSFNYIAVNSSLDFAAQLDNSRGFCPFLQVLVWPSLVSLMAQDTASGAEMPQRPSGLLRDQIQLVKRKDLDRYEIVSIPDSLSFEKGFFIVIRACQVLAQKNDGIILVGVAGPSGAGKTVFTEKVLNFLPSIAVITMDNYNDSSRVIDGNFDDPRLTDYDTLLENIQGLKAGKPVQVPIYDFKSSSCIGYRTVEVPSSRIVIIEGIYALSERLRPLLDLRVSVTGGVHFDLVKRVLRDIQRAGQEPEEIIQQISETVYPMYKAFIEPDLQTAHVKIINKFNPFSGFQNPTYILKSTRAVTEDQIKAVISAEHTETTEETYDIYLLPPGEDPEACQSYLRMRNRDGKYNLMFEEWVTDSPFIISPRITFEVSVRLLGGLMALGYTIAAILKRNSHVFHDDKVSVKTDWLEQLNRLYVQVQGKDRNYVKYVAEKLELDGSYVPRTYIEQIQLEKLINDVMALPDDLKTKLSIDDDLVLSPKEALSRASADRRMKYLNRNISHSYSNQRDKSLSKLTRLAINNRRFDGRALESPAAIANQGVITQLSEQISTLNERMDEFTSRIEELNPKFANRKVSASQQNLALQAEACNGSGPTSLFLTGLGNGSLTGSMLPNSSSSSQLVRESPLMEELLLIARGQRQVMHQLDTLSNLLHEYCGERARLGRTDRTSRIPDVDFTIPLVLTLAIGAVGVFLFKGFTSQN 723
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere14g0338 723 PRINTS Uridine kinase signature 196 211 - -
Dere14g0338 723 PRINTS Uridine kinase signature 288 301 - -
Dere14g0338 723 PRINTS Uridine kinase signature 252 262 - -
Dere14g0338 723 PRINTS Uridine kinase signature 129 146 - -
Dere14g0338 723 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 129 300 IPR027417 -
Dere14g0338 723 Coils Coil 564 584 - -
Dere14g0338 723 Pfam Phosphoribulokinase / Uridine kinase family 132 300 IPR006083 GO:0005524|GO:0016301
Dere14g0338 723 Pfam CYTH domain 335 468 IPR023577 -
Dere14g0338 723 Gene3D - 318 477 - -
Dere14g0338 723 CDD UMPK_like 131 303 - -
Dere14g0338 723 Gene3D - 130 309 IPR027417 -
Dere14g0338 723 PANTHER URIDINE KINASE 81 487 - -
Dere14g0338 723 ProSiteProfiles CYTH domain profile. 312 474 IPR023577 -
Dere14g0338 723 SUPERFAMILY CYTH-like phosphatases 325 471 IPR033469 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere14g0338 Dere-ChrDere14 3475163 3481514 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere14g0338 131 300 PRT Gene Family AT5G40870 29.050 4.64e-18 85.9