Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere14g0309 ATGTCATCATCAAGTGGAATTGTTTGGAGCCATGAAGAAGAAAAGGCCTTTGAGAATGCCATCGCTATGCATTGGGTTGAGGAAGACTCAAAAGAGCAATGGGAGAAGATTGCATCAGCTGTTCCCAGCAAAAGCATGGAGGAATTGAAGCAACATTACCAATTCTTATTAGAAGATGTAAGTGCAATAGAGGCAGGCCATATTCCACTTCCCAACTACGCTGGAGGAGAAGAAGCCACTTCTTCAAATAAGGAATTGCATGGTTCTTCAAAGGCTTCTACTTCAGATAAGAGATCCAATTGCAATTACCGAAGTGGGTTTTCTGGGTTGGGACATGACTCTTCTGGGCATAGTGGTAAAGGAGGCTCTTCAAGATCTTCAGAACAAGAAAGGCGGAAAGGAATTCCGTGGACAGAAGAAGAGCATAGGTTATTTCTACTTGGTCTTGACAAATTTGGAAAGGGGGATTGGAGGAGCATATCGAGGAACTTTGTAATGTCTAGGACCCCAACTCAAGTGGCAAGCCATGCACAGAAGTACTTTATTAGGTTGAATTCCATGAATAGAGATAGGAGGAGGTCTAGCATCCATGACATAACAAGCGTGAACAATGGAGATGTGGCAGCTAACCAGGCACCAATAACAGGGCAGCACACAAGCACAAATCCATCAAGCACAATTGGTGTAGGACAATCTGTGAAGCATAGAGCTCATCAACCCCATATGCCTGCTGGTTTAGGGATGTATGGAGCACCACTAGGGCACCCAGTGGCTGCTCCACCAGGGCATATGGCATCTGCTGTAGGTACCCCTGTGATGCTTCCTCCTGGAACCCATCCTCATCCTCATCCTCCTTATGTTGTTCCACTTGCTTACCCTATGGCATCTCCAACAATGCACAGATAA 906 0.4558 MSSSSGIVWSHEEEKAFENAIAMHWVEEDSKEQWEKIASAVPSKSMEELKQHYQFLLEDVSAIEAGHIPLPNYAGGEEATSSNKELHGSSKASTSDKRSNCNYRSGFSGLGHDSSGHSGKGGSSRSSEQERRKGIPWTEEEHRLFLLGLDKFGKGDWRSISRNFVMSRTPTQVASHAQKYFIRLNSMNRDRRRSSIHDITSVNNGDVAANQAPITGQHTSTNPSSTIGVGQSVKHRAHQPHMPAGLGMYGAPLGHPVAAPPGHMASAVGTPVMLPPGTHPHPHPPYVVPLAYPMASPTMHR 301
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere14g0309 301 CDD SANT 9 57 IPR001005 -
Dere14g0309 301 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 129 185 IPR017930 -
Dere14g0309 301 ProSiteProfiles SANT domain profile. 8 53 IPR017884 -
Dere14g0309 301 Gene3D - 135 187 - -
Dere14g0309 301 ProSiteProfiles Myb-like domain profile. 129 181 IPR001005 -
Dere14g0309 301 MobiDBLite consensus disorder prediction 76 123 - -
Dere14g0309 301 ProSiteProfiles Myb-like domain profile. 9 57 IPR001005 -
Dere14g0309 301 SMART sant 133 183 IPR001005 -
Dere14g0309 301 SMART sant 5 59 IPR001005 -
Dere14g0309 301 Pfam Myb-like DNA-binding domain 9 56 IPR001005 -
Dere14g0309 301 Pfam Myb-like DNA-binding domain 136 181 IPR001005 -
Dere14g0309 301 ProSiteProfiles SANT domain profile. 137 185 IPR017884 -
Dere14g0309 301 SUPERFAMILY Homeodomain-like 131 186 IPR009057 -
Dere14g0309 301 NCBIfam myb-like DNA-binding domain, SHAQKYF class 133 183 IPR006447 GO:0003677
Dere14g0309 301 Gene3D - 2 70 - -
Dere14g0309 301 FunFam Transcription factor SRM1 1 70 - -
Dere14g0309 301 SUPERFAMILY Homeodomain-like 9 63 IPR009057 -
Dere14g0309 301 PANTHER TRANSCRIPTION FACTOR KUA1 5 294 - -
Dere14g0309 301 CDD SANT 136 181 IPR001005 -
Dere14g0309 301 FunFam transcription factor MYB1R1 135 186 - -
Dere14g0309 301 MobiDBLite consensus disorder prediction 74 136 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere14g0309 Dere-ChrDere14 3226825 3228141 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Dere14g0309 Myb_DNA-binding 1.5e-06 CL0123