Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere14g0296 ATGGCAGAGATTCTTGACGCTTGGCGTCTGATGATTGTCGTTTTCTTTTCGCTTCTGCTATTGAGTGCGCGAGTGAGTACGGAACCGACTCAGGACAAGCAAGCCCTCCTTGCTTTCATCTCTCAGACTCCACACTCCAATCGAGTCCAATGGAACCCATCCGACTCCGCCTGCAACTGGTTCGGGGTCCTGTGCGATGCTTCTCGCTCCTTTGTTCATTCTCTTCGTCTTCCCGGTGTTGGTCTTTTGGGTGGGATTCCTCCCAACACAATCGGTCGTCTCTCTCAGCTACGAGTCCTCAGTCTTCGCTCAAATGGTCTCAGCGGCGAGATCCCCGCCGATTTCTCCAATTTGACGTCGCTTCGTAGCGTCTACCTCCAGGATAACGACCTCTCCGGTGAGTTTCCTGCTGGTCTGACTCGGTTGACTCGATTGACGCGCTTGGATCTCTCGTCCAACAATTTTACGGGTTCAATCCCTTTCTCAATCAACAATATGACCCACTTGAGTGGTCTATTCTTGGAAAACAATAGATTCTCTGGTAATCTTCCAAGCATTACTGCCAATTTGGATGACTTCAATGTTTCCAATAATCGGCTCAATGGTTCTATCCCTGAATCCCTCTCGAGATTCTCTGCATCCTCATTCGCCGGAAACTTGGATCTCTGCGGAGGACCATTGCAACCATGTACCCCATTCTTTCCGGCTCCGGCGCCGTCGCCTTCCTCCCCTGTTGTACCCTCTACCCCAGTTCACAAAAAGTCCAATAAGCTCTCAAAAGCTGCCATTATCGCAATTGCAGTTGGGTGTTCTCTTGCAGCCCTGTTGCTCCTCCTCCTCCTCCTCTTTCTATGCCTTCGCAAACGCCGACGGGAGCAGACACCGAAGCAGCCGAAGCCCGTTGCGGCGACGCGTGCAGTGCCGGCGGAGGCCGGAACATCGTCTTCGAAGGACGATATCACTGGTGGGTCTGTGGAGGCAGAGAGGAACAAGTTGGTGTTCTTCGAAGGCGGAATATACAGCTTCGATTTGGAAGATTTGTTGAGGGCTTCTGCCGAAGTTCTGGGCAAAGGAAGCGTCGGAACATCCTATAAGGCCGTGCTGGAAGAAGGAACTACTGTGGTAGTGAAGAGATTGAAAGACGTAACTGTAACGAAGAAAGACTTCGAGGCGCAAATGGAGGTTCTGGGGAAGATTAAGCACGAGAATGTGGTTCCACTAAGAGCATTCTATTACTCCAAGGATGAGAAACTACTCGTCTATGATTACATGCCGTCTGGTAGCTTGTCTGCTTTGCTTCACGGAAGCAGAGGTTCGGGGAGGACGCCGCTGGACTGGGATAACCGGATGAGAATAGCACTGGGAGCAGCGAGAGGACTGCTCCACCTACACGTGTCAGGAAAAGTGGTCCACGGCAACATCAAATCCTCCAACATCCTTCTCCGCGGAAACGACAACGAGGCATGCGTTTCGGACTTCGGGCTGAACCCGTTATTTGCCAATTCAACCCCCTCCAACCGGGTTGCGAGCTATCGGGCCCCGGAAGTCATCGAAACCCGGAAAGTCACCTTCAAATCCGACGTATACAGCCTGGGGGTGTTGCTTCTGGAGCTCCTAACCGGGAAGGCACCGAACCAAGCGTCGCTGGGCGAGGAAGGGATCGACCTTCCGAGATGGGTTCAGTCGGTGGTTCGAGAAGAATGGACGGCCGAAGTGTTCGACGCAGAGCTCATGAGGTACCACAATATAGAGGAAGAGATGGTTCAGTTGTTGCAGATAGCCATGGCTTGCGTGTCGGTGGCCCCCGATCAGAGACCCTCCATGCAGGAGGTGGTTCGCATGATGGAGGATATCACTCGGAGCGAGACCGACGAGGGGTTGCGACAGTCGTCCGATGATCCTTCCAAGGGATCGGACGGTCAAACGCCACCTGCAGAGTCAAGGACTCCTAGATCGATCACACCTTAG 1968 0.5305 MAEILDAWRLMIVVFFSLLLLSARVSTEPTQDKQALLAFISQTPHSNRVQWNPSDSACNWFGVLCDASRSFVHSLRLPGVGLLGGIPPNTIGRLSQLRVLSLRSNGLSGEIPADFSNLTSLRSVYLQDNDLSGEFPAGLTRLTRLTRLDLSSNNFTGSIPFSINNMTHLSGLFLENNRFSGNLPSITANLDDFNVSNNRLNGSIPESLSRFSASSFAGNLDLCGGPLQPCTPFFPAPAPSPSSPVVPSTPVHKKSNKLSKAAIIAIAVGCSLAALLLLLLLLFLCLRKRRREQTPKQPKPVAATRAVPAEAGTSSSKDDITGGSVEAERNKLVFFEGGIYSFDLEDLLRASAEVLGKGSVGTSYKAVLEEGTTVVVKRLKDVTVTKKDFEAQMEVLGKIKHENVVPLRAFYYSKDEKLLVYDYMPSGSLSALLHGSRGSGRTPLDWDNRMRIALGAARGLLHLHVSGKVVHGNIKSSNILLRGNDNEACVSDFGLNPLFANSTPSNRVASYRAPEVIETRKVTFKSDVYSLGVLLLELLTGKAPNQASLGEEGIDLPRWVQSVVREEWTAEVFDAELMRYHNIEEEMVQLLQIAMACVSVAPDQRPSMQEVVRMMEDITRSETDEGLRQSSDDPSKGSDGQTPPAESRTPRSITP 655
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere14g0296 655 MobiDBLite consensus disorder prediction 615 655 - -
Dere14g0296 655 MobiDBLite consensus disorder prediction 633 655 - -
Dere14g0296 655 Pfam Protein kinase domain 352 613 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere14g0296 655 MobiDBLite consensus disorder prediction 615 632 - -
Dere14g0296 655 MobiDBLite consensus disorder prediction 294 322 - -
Dere14g0296 655 PANTHER OS05G0588300 PROTEIN 13 628 - -
Dere14g0296 655 Pfam Leucine rich repeat 74 131 IPR001611 GO:0005515
Dere14g0296 655 Gene3D Ribonuclease Inhibitor 29 187 IPR032675 -
Dere14g0296 655 SUPERFAMILY Protein kinase-like (PK-like) 353 615 IPR011009 -
Dere14g0296 655 Gene3D Ribonuclease Inhibitor 188 233 IPR032675 -
Dere14g0296 655 FunFam pollen receptor-like kinase 1 319 423 - -
Dere14g0296 655 Pfam Leucine rich repeat N-terminal domain 30 66 IPR013210 -
Dere14g0296 655 FunFam Probable inactive receptor kinase RLK902 29 187 - -
Dere14g0296 655 Gene3D Transferase(Phosphotransferase) domain 1 424 638 - -
Dere14g0296 655 ProSiteProfiles Protein kinase domain profile. 349 618 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere14g0296 655 SUPERFAMILY L domain-like 33 211 - -
Dere14g0296 655 FunFam protein STRUBBELIG-RECEPTOR FAMILY 8 424 629 - -
Dere14g0296 655 Gene3D Phosphorylase Kinase; domain 1 317 423 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere14g0296 Dere-ChrDere14 3047922 3050931 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere14g0296 32 639 Receptor kinase-like Gene Family AT5G58300 55.178 0.0 640
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Dere14g0296 Pkinase 6.2e-40 CL0016