Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere14g0294 ATGGCTTCACCATCCGAACTAAGCCTGGATTGCAAACCCCATAGCTATTCCATGCTTCTGAAATCTTTTGGCGATCAGACAGATCATACCTACAAGCTTGAAGAATTCCTTTCTCGACTAGAGGAAGAACGTCTCAAGATTGATGCTTTCAAGCGCGAGCTTCCTCTCTGCATGCAGCTTCTTACAAACGCTGTGGAGGCATCGAGGCAGCAACTTCAGGCCTTCAGAGCAAATCAAGGCACGAGGCCAGTACTAGAAGAATTCATACCCATCAAGCATTCAACCTCTGAAAGCTCTGAGAAGGCATCGAGCATATCAGACAAGGCAAATTGGATGACATCTGCTCAATTATGGAGCCAAGCAAATGAAGGAACCAAGCCACAATCCACAATTACATCACCTAAAGAAGCTGATATTGGCTTCAGTGTGAGCCCTAAGCAAGCTCTAGACAGCAAACAGAGGAATGGAGCCTTCCTTCCATTCACAAAAGAACGAAACTCTTGCCAAAGTGGCTCCACATTGCGGGTTATTCCAGAGTTGGCCCTTGCCTCTGCAGGGAAAGAAATGGATGACAAGAAATTTACAGAGCCAGAAAATGCAGTGTCATGTCCTAAGAGGGAAAATTCCGGTAAAGCTGGAGGAAACGGTACTGGAGTGGTCATTGATCAAGGAAAAGGGGGTGCAGTTGCATCTGATCCACAAACAACCAGCACTGCCAACACCACTAACCAAACTCATAGGAAGGCAAGAAGGTGCTGGTCACCCGACCTGCACCGCAGATTTGTGAATGCTCTTCAGATGCTAGGTGGATCTCAAGTGGCTACCCCAAAACAGATTAGGGAGCTGATGAAGGTTGACGGTTTGACCAACGATGAAGTTAAAAGCCATCTGCAGAAATATAGGCTTCACACTAGACGACCCAGTCCAAGCCCACAAGCAGCTGGGTCACCCGCACCCCAGCTTGTAGTCCTAGGAGGAATCTGGGTCCCACCAGAGTACGCCGCTGCCGCCGCCCACACAGGCGCTCCTGCCCTCTACGGCCCACACCCTACCTCCCACGCGCCACCTCCTCCGCACTACTGTACCGCCACTCCAGTGCATCAAGAATTCTACACTGCCGCGGCCCCGCAGCCACCTCCCCCGCACCACCACAGTCTCCCCCACCATCTCCACATGTACAAAACCAATTCGCACCAGAGCTCGCCGGAATCTGACATTAGAGGAGGCGGTGACAGGTCGGAGAGTATCGAGGACGGGAAGTCCGAAAGCAGCAGCTGGAAGGGAGAGAGCGGGGAGAACGACGGGGAGAGGAAAGGGCTGGCGGCACTGAGAGAAGACGGAGAAGACAGCAATGGGAGCGAGATCACTCTCAAATTCTAG 1380 0.5181 MASPSELSLDCKPHSYSMLLKSFGDQTDHTYKLEEFLSRLEEERLKIDAFKRELPLCMQLLTNAVEASRQQLQAFRANQGTRPVLEEFIPIKHSTSESSEKASSISDKANWMTSAQLWSQANEGTKPQSTITSPKEADIGFSVSPKQALDSKQRNGAFLPFTKERNSCQSGSTLRVIPELALASAGKEMDDKKFTEPENAVSCPKRENSGKAGGNGTGVVIDQGKGGAVASDPQTTSTANTTNQTHRKARRCWSPDLHRRFVNALQMLGGSQVATPKQIRELMKVDGLTNDEVKSHLQKYRLHTRRPSPSPQAAGSPAPQLVVLGGIWVPPEYAAAAAHTGAPALYGPHPTSHAPPPPHYCTATPVHQEFYTAAAPQPPPPHHHSLPHHLHMYKTNSHQSSPESDIRGGGDRSESIEDGKSESSSWKGESGENDGERKGLAALREDGEDSNGSEITLKF 459
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere14g0294 459 MobiDBLite consensus disorder prediction 188 252 - -
Dere14g0294 459 Coils Coil 33 53 - -
Dere14g0294 459 MobiDBLite consensus disorder prediction 394 459 - -
Dere14g0294 459 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 20 427 IPR044787 GO:0003700|GO:0006355
Dere14g0294 459 FunFam Myb family transcription factor 247 305 - -
Dere14g0294 459 MobiDBLite consensus disorder prediction 229 248 - -
Dere14g0294 459 SUPERFAMILY Homeodomain-like 245 306 IPR009057 -
Dere14g0294 459 MobiDBLite consensus disorder prediction 405 453 - -
Dere14g0294 459 Gene3D - 247 305 - -
Dere14g0294 459 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 245 305 IPR017930 -
Dere14g0294 459 Pfam Myb-like DNA-binding domain 250 301 IPR001005 -
Dere14g0294 459 NCBIfam myb-like DNA-binding domain, SHAQKYF class 248 303 IPR006447 GO:0003677
Dere14g0294 459 Coils Coil 58 78 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere14g0294 Dere-ChrDere14 3022803 3024990 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere14g0294 1 459 G2-like Transcription Factor Family AT2G03500 52.391 2.97e-141 410
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Dere14g0294 Myb_DNA-binding 9.9e-06 CL0123
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere03g1125 03 18079747 18082372 Dere14g0294 14 3022803 3024990 CCT
Dere14g0294 14 3022803 3024990 Dere14g0294 14 3022803 3024990 ECH