Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Dere14g0294 | ATGGCTTCACCATCCGAACTAAGCCTGGATTGCAAACCCCATAGCTATTCCATGCTTCTGAAATCTTTTGGCGATCAGACAGATCATACCTACAAGCTTGAAGAATTCCTTTCTCGACTAGAGGAAGAACGTCTCAAGATTGATGCTTTCAAGCGCGAGCTTCCTCTCTGCATGCAGCTTCTTACAAACGCTGTGGAGGCATCGAGGCAGCAACTTCAGGCCTTCAGAGCAAATCAAGGCACGAGGCCAGTACTAGAAGAATTCATACCCATCAAGCATTCAACCTCTGAAAGCTCTGAGAAGGCATCGAGCATATCAGACAAGGCAAATTGGATGACATCTGCTCAATTATGGAGCCAAGCAAATGAAGGAACCAAGCCACAATCCACAATTACATCACCTAAAGAAGCTGATATTGGCTTCAGTGTGAGCCCTAAGCAAGCTCTAGACAGCAAACAGAGGAATGGAGCCTTCCTTCCATTCACAAAAGAACGAAACTCTTGCCAAAGTGGCTCCACATTGCGGGTTATTCCAGAGTTGGCCCTTGCCTCTGCAGGGAAAGAAATGGATGACAAGAAATTTACAGAGCCAGAAAATGCAGTGTCATGTCCTAAGAGGGAAAATTCCGGTAAAGCTGGAGGAAACGGTACTGGAGTGGTCATTGATCAAGGAAAAGGGGGTGCAGTTGCATCTGATCCACAAACAACCAGCACTGCCAACACCACTAACCAAACTCATAGGAAGGCAAGAAGGTGCTGGTCACCCGACCTGCACCGCAGATTTGTGAATGCTCTTCAGATGCTAGGTGGATCTCAAGTGGCTACCCCAAAACAGATTAGGGAGCTGATGAAGGTTGACGGTTTGACCAACGATGAAGTTAAAAGCCATCTGCAGAAATATAGGCTTCACACTAGACGACCCAGTCCAAGCCCACAAGCAGCTGGGTCACCCGCACCCCAGCTTGTAGTCCTAGGAGGAATCTGGGTCCCACCAGAGTACGCCGCTGCCGCCGCCCACACAGGCGCTCCTGCCCTCTACGGCCCACACCCTACCTCCCACGCGCCACCTCCTCCGCACTACTGTACCGCCACTCCAGTGCATCAAGAATTCTACACTGCCGCGGCCCCGCAGCCACCTCCCCCGCACCACCACAGTCTCCCCCACCATCTCCACATGTACAAAACCAATTCGCACCAGAGCTCGCCGGAATCTGACATTAGAGGAGGCGGTGACAGGTCGGAGAGTATCGAGGACGGGAAGTCCGAAAGCAGCAGCTGGAAGGGAGAGAGCGGGGAGAACGACGGGGAGAGGAAAGGGCTGGCGGCACTGAGAGAAGACGGAGAAGACAGCAATGGGAGCGAGATCACTCTCAAATTCTAG | 1380 | 0.5181 | MASPSELSLDCKPHSYSMLLKSFGDQTDHTYKLEEFLSRLEEERLKIDAFKRELPLCMQLLTNAVEASRQQLQAFRANQGTRPVLEEFIPIKHSTSESSEKASSISDKANWMTSAQLWSQANEGTKPQSTITSPKEADIGFSVSPKQALDSKQRNGAFLPFTKERNSCQSGSTLRVIPELALASAGKEMDDKKFTEPENAVSCPKRENSGKAGGNGTGVVIDQGKGGAVASDPQTTSTANTTNQTHRKARRCWSPDLHRRFVNALQMLGGSQVATPKQIRELMKVDGLTNDEVKSHLQKYRLHTRRPSPSPQAAGSPAPQLVVLGGIWVPPEYAAAAAHTGAPALYGPHPTSHAPPPPHYCTATPVHQEFYTAAAPQPPPPHHHSLPHHLHMYKTNSHQSSPESDIRGGGDRSESIEDGKSESSSWKGESGENDGERKGLAALREDGEDSNGSEITLKF | 459 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Dere14g0294 | 459 | MobiDBLite | consensus disorder prediction | 188 | 252 | - | - | |
Dere14g0294 | 459 | Coils | Coil | 33 | 53 | - | - | |
Dere14g0294 | 459 | MobiDBLite | consensus disorder prediction | 394 | 459 | - | - | |
Dere14g0294 | 459 | PANTHER | MYB FAMILY TRANSCRIPTION FACTOR | 20 | 427 | IPR044787 | GO:0003700|GO:0006355 | |
Dere14g0294 | 459 | FunFam | Myb family transcription factor | 247 | 305 | - | - | |
Dere14g0294 | 459 | MobiDBLite | consensus disorder prediction | 229 | 248 | - | - | |
Dere14g0294 | 459 | SUPERFAMILY | Homeodomain-like | 245 | 306 | IPR009057 | - | |
Dere14g0294 | 459 | MobiDBLite | consensus disorder prediction | 405 | 453 | - | - | |
Dere14g0294 | 459 | Gene3D | - | 247 | 305 | - | - | |
Dere14g0294 | 459 | ProSiteProfiles | Myb-type HTH DNA-binding domain profile. | 245 | 305 | IPR017930 | - | |
Dere14g0294 | 459 | Pfam | Myb-like DNA-binding domain | 250 | 301 | IPR001005 | - | |
Dere14g0294 | 459 | NCBIfam | myb-like DNA-binding domain, SHAQKYF class | 248 | 303 | IPR006447 | GO:0003677 | |
Dere14g0294 | 459 | Coils | Coil | 58 | 78 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Dere14g0294 | Dere-ChrDere14 | 3022803 | 3024990 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Dere14g0294 | 1 | 459 | G2-like Transcription Factor Family | AT2G03500 | 52.391 | 2.97e-141 | 410 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | GARP-G2-like | Dere14g0294 | Myb_DNA-binding | 9.9e-06 | CL0123 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Dere03g1125 | 03 | 18079747 | 18082372 | Dere14g0294 | 14 | 3022803 | 3024990 | CCT | |
Dere14g0294 | 14 | 3022803 | 3024990 | Dere14g0294 | 14 | 3022803 | 3024990 | ECH |