Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere14g0292 ATGTTTTCACACGTTTATATGCATACACGGAATGTGCCACAAGAACTATCCATTAGGGTAAGGACTTTCGAGAGGATCAGTGAAGCCAATGAAAGGGACAAGGCATCTGATTGTTCTTCATGTCTTATTTTAGCCATAGGTGCGCACGTACAGCTGACAATGGCAGGCATTATGAACTACTCTGCGAAAATGAAGGACCCAGAAGAAGATCAAGTTAAATCCAGAAAGCCTATGCAGAAACCGACGGATCGCAGAAGAAGAGGTAGGAGAAGAAGCCATTGCAAACAAGAGATAGTACAAGAAAATGGGGTTGAATTCGAACTGAATCCCTCTGCTTCTTGCAAAAGCCTTGTGTTCCACCATAGGCCCGGCTATGGCCAGCTTGGGACAAGGTGTGTGGTCAAAGCTAACCACTTTCTCGCAGATATATCAGCATCAGACTTGAGCCATTACAGTGTTAAGATAACACCTGAAGTCACTTCTCGTAAAATAAGCAAAGCTATCATTGCTGAGTTGGTGAGGCTTCACAGAAATACTGACTTGGGCATGAGGCTCCCCGTTTATGATGGAGGAAGGAATCTTTACACTGCTGGTTTGCTTCCTTTTACAAACAAAGAATTCACCATAACACTCAGCGAAGATGATGAGGGTACTGGAAATACCAGGGAAAGAGAGTTTAGGGTCAGAATCAAGTTTGCAGCTCGTGTTAGCATGCATCAACTACGGGAGCTTCTTAATGGGAAGCAAGTGGACACCCCACAAGAAGCACTTAGCATTATTGATATTGTATTGAGGGAGCTTGCGGCTCAAAGTTACGTATCAGTTGGAAGGTTTCTCTATTCTGCCGATATAAAAAAACCGCAGCAACTAGGTGGCGGTCTGGAATCATGGCGGGGCTTCTACCAGAGTATAAGGCCTACTCAGATGGGATTGTCACTTAACATTGACATGTCATCAATGGCGTTTATTGAGCCACTCCCTGTCATTGATTTTGTTGCTCAAATTCTGGGTAAAGATGTGCATTCAAAACCATTGTCAGATGCAGATCGTGTCAAGATTAAAAAAGCCCTAAGAGGTGTGAAAGTTGAAGTTACACATAGAGGAAATGTTCGAAGGAAGTACAGGATCTCAGGACTGACATCACAGCCTACAAGAGAGCTTATATTCCCTCTTGATGAGCAAATGAACATGAAATCAGTAGTTGATTATTTTCGAGAGATGTACGGATATACAATTAAGTATTCTCATCTACCATGCCTGCAAGTAGGGAACGAAAAGAAGGTGAACTATTTGCCCATGGAGGCGTGCAAGATAGTTGGGGGCCAGAGATATACAAAAGGTCTAAACGAAAAGCAGATAACTTCTCTGCTTAAGGTTTCATGCCAACGACCCCGCGAACAAGAGCTAGACATTCTACAGACAGTTCAACAAAACGATTATGAGCATAACCCCTATGCAAAGGAATTTGGTATCAGCATAGACGACAAGCTTGCATCGGTTGAGGCTCGTGTTCTGCCTGCTCCATGGTTGAAATATCATGATACAGGAAGGGAGAAAGAGTACTTGCCACAAGTTGGTCAGTGGAATATGATGAACAAGAAAGTTATAAACGGAAGCACAGTAACTTATTGGGCTTGTATCAACTTCTCAAGAAGTGTTCAAGAAAGCACGGCTCGTGGTTTTTGCCAACAGTTGGTTCAGATGTGCCAAATCTCAGGCATGGAATTCAGTCAGGACCCAGTGATTCCTATATATTCAGCAAGACCAGATCAGGTTAAAAAGGCCTTAAAGTATGTGCATTGTGCTGCTTTGGACAAACATGGTGGGAAAGAGCTAGAGTTGCTTATTGCCATTCTTCCCGACAATAATGGCTCTCTGTATGGTGATCTCAAAAGGATTTGTGAAACAGATCTGGGGTTAATTTCTCAGTGCTGCCTCACAAAACACGTCTTCAAGATTAATAGACAGTACCTGGCAAATGTGGCACTTAAGATCAATGTCAAGATGGGAGGAAGAAACACAGTACTTTTGGATGCTTTAAGTTGGAGGATTCCATTGGTTAGTGACATTCCAACAATAATATTTGGAGCTGATGTAACTCATCCAGAGTCTGGAGAGGATTCTTCTCCATCCATTGCTGCTGTTGTAGCCTCACAGGACTGGCCTGAAGTAACAAAGTATGCAGGACTTGTGTGTGCTCAGCCTCATCGTGAAGAACTCATTCAAGATCTCTTCAAGTGTTGGAAAGATCCTCAGCGCGGTATAGTTTATGGTGGCATGATCAGAGAGCTCTTACTCTCATTTAAGAAGGCAACAGGACAAAAACCATTGAGGATAATCTTTTACAGGGATGGGGTAAGTGAAGGGCAATTCTACCAGGTTTTATTGTACGAGCTTGATGCCATCCGTAAGGCTTGTGCATCTCTGGAACCTAGTTACCAACCACCGGTAACATTTGTTGTGGTTCAAAAACGGCATCACACTAGACTCTTCTCAAACAATCATGATGACAGAAACAGCACTGACAGGAGTGGCAACATCCTACCAGGTACTGTGGTGGATTCTAAGATCTGTCATCCTACAGAATTCGACTTCTATCTATGCAGTCATGCGGGAATACAGGGCACAAGTAGACCAGCTCACTATCATGTCCTCTGGGACGAGAACAAATTCACTGCAGATGAGATTCAATCTTTAACTAACAACTTATGCTACACGTATGCAAGATGTACAAGATCTGTTTCCGTAGTGCCTCCAGCATACTATGCTCATCTGGCAGCTTACAGAGCTCGATTCTACATGGAACCTGATGTCCATGAAAATGCTAAAGCGCGAGGTGGAAGATCAAAAGATGGTTCAGTTCGGCCATTGCCTGCTCTAAAAGAGAAAGTGAAGAATGTAATGTTTTACTGTTGA 2916 0.4318 MFSHVYMHTRNVPQELSIRVRTFERISEANERDKASDCSSCLILAIGAHVQLTMAGIMNYSAKMKDPEEDQVKSRKPMQKPTDRRRRGRRRSHCKQEIVQENGVEFELNPSASCKSLVFHHRPGYGQLGTRCVVKANHFLADISASDLSHYSVKITPEVTSRKISKAIIAELVRLHRNTDLGMRLPVYDGGRNLYTAGLLPFTNKEFTITLSEDDEGTGNTREREFRVRIKFAARVSMHQLRELLNGKQVDTPQEALSIIDIVLRELAAQSYVSVGRFLYSADIKKPQQLGGGLESWRGFYQSIRPTQMGLSLNIDMSSMAFIEPLPVIDFVAQILGKDVHSKPLSDADRVKIKKALRGVKVEVTHRGNVRRKYRISGLTSQPTRELIFPLDEQMNMKSVVDYFREMYGYTIKYSHLPCLQVGNEKKVNYLPMEACKIVGGQRYTKGLNEKQITSLLKVSCQRPREQELDILQTVQQNDYEHNPYAKEFGISIDDKLASVEARVLPAPWLKYHDTGREKEYLPQVGQWNMMNKKVINGSTVTYWACINFSRSVQESTARGFCQQLVQMCQISGMEFSQDPVIPIYSARPDQVKKALKYVHCAALDKHGGKELELLIAILPDNNGSLYGDLKRICETDLGLISQCCLTKHVFKINRQYLANVALKINVKMGGRNTVLLDALSWRIPLVSDIPTIIFGADVTHPESGEDSSPSIAAVVASQDWPEVTKYAGLVCAQPHREELIQDLFKCWKDPQRGIVYGGMIRELLLSFKKATGQKPLRIIFYRDGVSEGQFYQVLLYELDAIRKACASLEPSYQPPVTFVVVQKRHHTRLFSNNHDDRNSTDRSGNILPGTVVDSKICHPTEFDFYLCSHAGIQGTSRPAHYHVLWDENKFTADEIQSLTNNLCYTYARCTRSVSVVPPAYYAHLAAYRARFYMEPDVHENAKARGGRSKDGSVRPLPALKEKVKNVMFYC 971
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere14g0292 971 Pfam Piwi domain 615 934 IPR003165 GO:0003676
Dere14g0292 971 ProSiteProfiles PAZ domain profile. 326 440 IPR003100 GO:0005515
Dere14g0292 971 Pfam N-terminal domain of argonaute 131 264 IPR032474 -
Dere14g0292 971 Gene3D paz domain 320 444 - -
Dere14g0292 971 Pfam Argonaute linker 1 domain 274 323 IPR014811 -
Dere14g0292 971 Gene3D - 504 677 - -
Dere14g0292 971 FunFam Argonaute 10 504 677 - -
Dere14g0292 971 SUPERFAMILY Ribonuclease H-like 603 936 IPR012337 -
Dere14g0292 971 SUPERFAMILY PAZ domain 321 480 IPR036085 GO:0005515
Dere14g0292 971 ProSiteProfiles Piwi domain profile. 614 935 IPR003165 GO:0003676
Dere14g0292 971 Pfam Mid domain of argonaute 523 599 IPR032473 -
Dere14g0292 971 SMART Piwi_a_2 614 935 IPR003165 GO:0003676
Dere14g0292 971 CDD Piwi_ago-like 484 934 IPR045246 -
Dere14g0292 971 Pfam PAZ domain 330 456 IPR003100 GO:0005515
Dere14g0292 971 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 2C 111 936 - -
Dere14g0292 971 MobiDBLite consensus disorder prediction 79 93 - -
Dere14g0292 971 Gene3D - 683 971 IPR036397 GO:0003676
Dere14g0292 971 MobiDBLite consensus disorder prediction 65 94 - -
Dere14g0292 971 CDD PAZ_argonaute_like 325 439 - -
Dere14g0292 971 FunFam protein argonaute 10-like 683 971 - -
Dere14g0292 971 Pfam Argonaute linker 2 domain 470 512 IPR032472 -
Dere14g0292 971 SMART PAZ_2_a_3 330 462 IPR003100 GO:0005515
Dere14g0292 971 SMART DUF1785_2 273 325 IPR014811 -
Dere14g0292 971 FunFam Protein argonaute-2 319 445 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere14g0292 Dere-ChrDere14 2995167 3003118 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere14g0292 119 971 Eukaryotic Initiation Factors Gene Family AT5G43810 76.074 0.0 1412
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere14g0292 14 2995167 3003118 Dere14g0292 14 2995167 3003118 ECH