Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere14g0286 ATGGATAAGAAAAAGGTGGCGGTTCCGCTTGTTTGCCACGGTCATTCCCGGCCTGTAGTGGATCTTTTTTACAGTCCTGTTACGCCCGATGGATTCTTCCTCATCAGTGCAAGCAAAGATTCTAGTCCTATGCTCAGAAACGGAGAGACTGGAGATTGGATTGGAACATTTGAAGGGCACAAAGGTGCGGTATGGAGTTGCTGCTTGGATACAAATGCTTTACGTGCTGCAACTGCCTCTGCTGATTTCTCAACGAAAGTTTGGGACGCATTAACAGGAGATGAATTACACTCGTTTGAACATAAGCATATTGTTCGTGCATGTGCTTTTTCTGAGGATACACATCTTCTACTCACTGGAGGAGTAGAGAAAATTCTCCGAATTTATGACATGAATCGTCCTGATGCACCACCCAGAGAAGTTGATAAGTCGCCTGGTTCAGTAAGAACTGTTGCATGGCTTCATAGTGACCAGACAATATTGAGTTCTTGTACTGATTTGGGAGGTGTCAGGTTGTGGGATTTAAGAAGTGGCAAAATAGTCCAGACACTTGAGACCAAGTCCTCAGTGACCAGCGCTGAAGTGAGTCAGGATGGTCGTTACATCACAACGGCTGATGGTTCTACAGTTAAATTTTGGGATGCAAATTACTACGGATTGGTGAAGAGCTATGATATGCCCTGCACTGTTGAATCAGCTTCATTGGAACCTAAGTATGGAAATAAATTTATTGCTGGGGGAGAAGATATGTGGGTTCATGTTTTTGATTTCCATAGCGGCAATGAGATTGCATGCAACAAGGGGCACCATGGTCCTGTACACTGTGTACGTTTCTCTCCTGGGGGAGAATCATATGCCTCAGGATCTGAGGATGGAACCATCAGAATATGGCAAACTGGCCCTTTGACCAATGATGAATCGGACTCTATATCCGCAAATGGACCAATTGCAAAGGTCAAGGTTAATGCAGACGAGGTTTCACGCAAGATTGAGGGTTTTCATATTGCAGATGAGGGGACATCCAAAGAAAAGGAAGAGGCAGGGGAGGAATAA 1053 0.4473 MDKKKVAVPLVCHGHSRPVVDLFYSPVTPDGFFLISASKDSSPMLRNGETGDWIGTFEGHKGAVWSCCLDTNALRAATASADFSTKVWDALTGDELHSFEHKHIVRACAFSEDTHLLLTGGVEKILRIYDMNRPDAPPREVDKSPGSVRTVAWLHSDQTILSSCTDLGGVRLWDLRSGKIVQTLETKSSVTSAEVSQDGRYITTADGSTVKFWDANYYGLVKSYDMPCTVESASLEPKYGNKFIAGGEDMWVHVFDFHSGNEIACNKGHHGPVHCVRFSPGGESYASGSEDGTIRIWQTGPLTNDESDSISANGPIAKVKVNADEVSRKIEGFHIADEGTSKEKEEAGEE 350
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere14g0286 350 Gene3D - 9 315 IPR015943 GO:0005515
Dere14g0286 350 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 266 298 - -
Dere14g0286 350 SUPERFAMILY WD40 repeat-like 4 300 IPR036322 GO:0005515
Dere14g0286 350 ProSiteProfiles Trp-Asp (WD) repeats profile. 57 98 IPR001680 GO:0005515
Dere14g0286 350 SMART WD40_4 92 130 IPR001680 GO:0005515
Dere14g0286 350 SMART WD40_4 134 174 IPR001680 GO:0005515
Dere14g0286 350 SMART WD40_4 259 298 IPR001680 GO:0005515
Dere14g0286 350 SMART WD40_4 217 256 IPR001680 GO:0005515
Dere14g0286 350 SMART WD40_4 177 214 IPR001680 GO:0005515
Dere14g0286 350 SMART WD40_4 5 47 IPR001680 GO:0005515
Dere14g0286 350 SMART WD40_4 50 89 IPR001680 GO:0005515
Dere14g0286 350 Pfam WD domain, G-beta repeat 54 89 IPR001680 GO:0005515
Dere14g0286 350 Pfam WD domain, G-beta repeat 265 297 IPR001680 GO:0005515
Dere14g0286 350 Pfam WD domain, G-beta repeat 179 214 IPR001680 GO:0005515
Dere14g0286 350 Pfam WD domain, G-beta repeat 94 130 IPR001680 GO:0005515
Dere14g0286 350 CDD WD40 14 298 - -
Dere14g0286 350 FunFam Serine-threonine kinase receptor-associated protein 8 320 - -
Dere14g0286 350 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT I 7 340 - -
Dere14g0286 350 ProSiteProfiles Trp-Asp (WD) repeats profile. 266 298 IPR001680 GO:0005515
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere14g0286 9 296 Eukaryotic Initiation Factors Gene Family AT2G46290 28.834 1.04e-38 139