Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere14g0267 ATGGCCACCCCCACCGTCGCCTTACCCAGAGACGAATCTGATTATGATAGTAGCTGCTCCTCCATCACCACCATGCCGGAATCGAGCCGGAGCTGGCTGAGCAACCTCAGCTTCAGCAGCCGTCGCCGCAGCAGCTCCGTCTCCGTTTGTTCCTCCACCACCACAGACACCACCACCTCCTCTCTGTTCCTCGGCTCCCACGCCAAGCCCCACAAGGCCAACCAAGCCGCATGGGAGGCTATGACCAGCCTCCGCCGCGACATTAACGGTCAACTCGGCCTCCACCACTTCCGCATCCTCCGGCGACTTGGCGGCGGCGACATCGGCAACGTGTACCTCTGCCAGATTAGGAACCCGCTTGCTGCGGGGTCGAAACAGAGCCTCTACGCCATGAAAGTGGTGGACAGAGAAGCGCTTTCCGTGAGGAACAAGTTGCAGAGGGCTGACATGGAGAAGGAGATTCTGGGTATGCTTGACCACCCATTTTTGCCCACTTTATATGCTGAGTTTGAGGCCTCTCATTACTCATGCTTGGTCATGGAGTTCTGTCCTGGTGGTGATTTGTATGCTTCTAGGCAGCGTCAGCCAGGGAAGCGATTCAGCATTCCATCAGCAAAGTTTTATGCAGCTGAGACACTCCTGGCTTTGGAGTATCTTCACATGATGGGCATAGTATATAGAGATTTGAAGCCGGAGAACGTGCTGGTGAGAGAGGATGGGCATATTATGCTCTCTGATTTTGATCTTTCTCTCAAATGCGACGTCGTTCCAAAGCTCTTGAGAAGTAAGTCCAGTTTCAAGAGTACTACAAGGAGCTCTTCATCATCATCTCCTGCTTGTGCTGCCCCCATGCAATCTTGTTTCTCATCAGCATCATCAAGCAGCAAGAACAGGAAAGAAAGTAGAGTCACAACAATTATAAGAGAAAATGTTCAAGTCCAAGAAGAAGAAGATGATGATGATGAGGATGATGATGAGCCAGAGCTAGTGGCAGAGCCCATCAACGCAAGGTCTAAGTCATTTGTGGGGACTCATGAGTATTTAGCGCCAGAGGTGATATCGGGGCAAGGCCATGGGAGTGCAGTGGATTGGTGGACTTTTGGGGTTTTCTTATATGAGATGTTATATGGGAGAACACCCTTCAAAGGTGAAAACAATGGGAAAACACTCATAAACATCCTGAAGCAGCCATTAGCTTTCCCCAGAATTGCAGCTAGTAGCAGCAAGGAGTTTGAAGAGATGGTGAGAGTTCAAGACCTTATAAGCAAGCTCTTGGTGAAGAATCCCAAGAAGAGAATTGGAAGCTGCATGGGTTCTGTTGAGATTAAGAGACATGAGTTCTTCAAGGGTGTGAATTGGGCTCTGATTAGATCAGTTAGGCCTCCTGAGGTTCCGGCTGATATGAACAAGATTAGGAGTAGCAGAGTTTTGTTACCAAAACTAAGCAAGAAAGACAGGGATCAACCATATCAGATTACTCATCATTTTGACTACTTCTAA 1500 0.4913 MATPTVALPRDESDYDSSCSSITTMPESSRSWLSNLSFSSRRRSSSVSVCSSTTTDTTTSSLFLGSHAKPHKANQAAWEAMTSLRRDINGQLGLHHFRILRRLGGGDIGNVYLCQIRNPLAAGSKQSLYAMKVVDREALSVRNKLQRADMEKEILGMLDHPFLPTLYAEFEASHYSCLVMEFCPGGDLYASRQRQPGKRFSIPSAKFYAAETLLALEYLHMMGIVYRDLKPENVLVREDGHIMLSDFDLSLKCDVVPKLLRSKSSFKSTTRSSSSSSPACAAPMQSCFSSASSSSKNRKESRVTTIIRENVQVQEEEDDDDEDDDEPELVAEPINARSKSFVGTHEYLAPEVISGQGHGSAVDWWTFGVFLYEMLYGRTPFKGENNGKTLINILKQPLAFPRIAASSSKEFEEMVRVQDLISKLLVKNPKKRIGSCMGSVEIKRHEFFKGVNWALIRSVRPPEVPADMNKIRSSRVLLPKLSKKDRDQPYQITHHFDYF 499
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere14g0267 499 FunFam serine/threonine-protein kinase D6PK-like 336 466 - -
Dere14g0267 499 Gene3D Phosphorylase Kinase; domain 1 95 182 - -
Dere14g0267 499 CDD STKc_phototropin_like 95 466 - -
Dere14g0267 499 MobiDBLite consensus disorder prediction 267 327 - -
Dere14g0267 499 FunFam protein kinase PINOID 2 95 182 - -
Dere14g0267 499 Pfam Protein kinase domain 338 448 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere14g0267 499 Pfam Protein kinase domain 98 254 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere14g0267 499 Gene3D Transferase(Phosphotransferase) domain 1 183 252 - -
Dere14g0267 499 MobiDBLite consensus disorder prediction 313 327 - -
Dere14g0267 499 MobiDBLite consensus disorder prediction 267 310 - -
Dere14g0267 499 FunFam protein kinase PINOID 183 251 - -
Dere14g0267 499 PANTHER FLIPPASE KINASE 1-RELATED 39 469 - -
Dere14g0267 499 MobiDBLite consensus disorder prediction 1 22 - -
Dere14g0267 499 Gene3D Transferase(Phosphotransferase) domain 1 336 466 - -
Dere14g0267 499 SUPERFAMILY Protein kinase-like (PK-like) 83 468 IPR011009 -
Dere14g0267 499 SMART serkin_6 97 448 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere14g0267 499 ProSiteProfiles Protein kinase domain profile. 97 448 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere14g0267 499 ProSitePatterns Serine/Threonine protein kinases active-site signature. 224 236 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere14g0267 Dere-ChrDere14 2811091 2812764 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere14g0267 1 499 AGC Kinase Gene Family AT2G26700 56.538 0.0 585
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_RSK-2 Dere14g0267 Pkinase 7.8e-31 CL0016
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere03g1153 03 18594427 18596246 Dere14g0267 14 2811091 2812764 CCT
Dere14g0267 14 2811091 2812764 Dere14g0267 14 2811091 2812764 ECH