LGRPv2

Gene search

Sequence information

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Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Dere14g0267	ATGGCCACCCCCACCGTCGCCTTACCCAGAGACGAATCTGATTATGATAGTAGCTGCTCCTCCATCACCACCATGCCGGAATCGAGCCGGAGCTGGCTGAGCAACCTCAGCTTCAGCAGCCGTCGCCGCAGCAGCTCCGTCTCCGTTTGTTCCTCCACCACCACAGACACCACCACCTCCTCTCTGTTCCTCGGCTCCCACGCCAAGCCCCACAAGGCCAACCAAGCCGCATGGGAGGCTATGACCAGCCTCCGCCGCGACATTAACGGTCAACTCGGCCTCCACCACTTCCGCATCCTCCGGCGACTTGGCGGCGGCGACATCGGCAACGTGTACCTCTGCCAGATTAGGAACCCGCTTGCTGCGGGGTCGAAACAGAGCCTCTACGCCATGAAAGTGGTGGACAGAGAAGCGCTTTCCGTGAGGAACAAGTTGCAGAGGGCTGACATGGAGAAGGAGATTCTGGGTATGCTTGACCACCCATTTTTGCCCACTTTATATGCTGAGTTTGAGGCCTCTCATTACTCATGCTTGGTCATGGAGTTCTGTCCTGGTGGTGATTTGTATGCTTCTAGGCAGCGTCAGCCAGGGAAGCGATTCAGCATTCCATCAGCAAAGTTTTATGCAGCTGAGACACTCCTGGCTTTGGAGTATCTTCACATGATGGGCATAGTATATAGAGATTTGAAGCCGGAGAACGTGCTGGTGAGAGAGGATGGGCATATTATGCTCTCTGATTTTGATCTTTCTCTCAAATGCGACGTCGTTCCAAAGCTCTTGAGAAGTAAGTCCAGTTTCAAGAGTACTACAAGGAGCTCTTCATCATCATCTCCTGCTTGTGCTGCCCCCATGCAATCTTGTTTCTCATCAGCATCATCAAGCAGCAAGAACAGGAAAGAAAGTAGAGTCACAACAATTATAAGAGAAAATGTTCAAGTCCAAGAAGAAGAAGATGATGATGATGAGGATGATGATGAGCCAGAGCTAGTGGCAGAGCCCATCAACGCAAGGTCTAAGTCATTTGTGGGGACTCATGAGTATTTAGCGCCAGAGGTGATATCGGGGCAAGGCCATGGGAGTGCAGTGGATTGGTGGACTTTTGGGGTTTTCTTATATGAGATGTTATATGGGAGAACACCCTTCAAAGGTGAAAACAATGGGAAAACACTCATAAACATCCTGAAGCAGCCATTAGCTTTCCCCAGAATTGCAGCTAGTAGCAGCAAGGAGTTTGAAGAGATGGTGAGAGTTCAAGACCTTATAAGCAAGCTCTTGGTGAAGAATCCCAAGAAGAGAATTGGAAGCTGCATGGGTTCTGTTGAGATTAAGAGACATGAGTTCTTCAAGGGTGTGAATTGGGCTCTGATTAGATCAGTTAGGCCTCCTGAGGTTCCGGCTGATATGAACAAGATTAGGAGTAGCAGAGTTTTGTTACCAAAACTAAGCAAGAAAGACAGGGATCAACCATATCAGATTACTCATCATTTTGACTACTTCTAA	1500	0.4913	MATPTVALPRDESDYDSSCSSITTMPESSRSWLSNLSFSSRRRSSSVSVCSSTTTDTTTSSLFLGSHAKPHKANQAAWEAMTSLRRDINGQLGLHHFRILRRLGGGDIGNVYLCQIRNPLAAGSKQSLYAMKVVDREALSVRNKLQRADMEKEILGMLDHPFLPTLYAEFEASHYSCLVMEFCPGGDLYASRQRQPGKRFSIPSAKFYAAETLLALEYLHMMGIVYRDLKPENVLVREDGHIMLSDFDLSLKCDVVPKLLRSKSSFKSTTRSSSSSSPACAAPMQSCFSSASSSSKNRKESRVTTIIRENVQVQEEEDDDDEDDDEPELVAEPINARSKSFVGTHEYLAPEVISGQGHGSAVDWWTFGVFLYEMLYGRTPFKGENNGKTLINILKQPLAFPRIAASSSKEFEEMVRVQDLISKLLVKNPKKRIGSCMGSVEIKRHEFFKGVNWALIRSVRPPEVPADMNKIRSSRVLLPKLSKKDRDQPYQITHHFDYF	499

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Annotation information

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Seq ID	Length	Analysis	Description	Start	End	IPR	GO
Dere14g0267	499	FunFam	serine/threonine-protein kinase D6PK-like	336	466	-	-
Dere14g0267	499	Gene3D	Phosphorylase Kinase; domain 1	95	182	-	-
Dere14g0267	499	CDD	STKc_phototropin_like	95	466	-	-
Dere14g0267	499	MobiDBLite	consensus disorder prediction	267	327	-	-
Dere14g0267	499	FunFam	protein kinase PINOID 2	95	182	-	-
Dere14g0267	499	Pfam	Protein kinase domain	338	448	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
Dere14g0267	499	Pfam	Protein kinase domain	98	254	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
Dere14g0267	499	Gene3D	Transferase(Phosphotransferase) domain 1	183	252	-	-
Dere14g0267	499	MobiDBLite	consensus disorder prediction	313	327	-	-
Dere14g0267	499	MobiDBLite	consensus disorder prediction	267	310	-	-

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Duplication type information

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Select	Gene	Chromosome	Start	End	Duplicated_type
	Dere14g0267	Dere-ChrDere14	2811091	2812764	Dispersed/Wgd

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Functional genes information

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Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Dere14g0267	1	499	AGC Kinase Gene Family	AT2G26700	56.538	0.0	585

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Transcription factors information

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Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	AGC_RSK-2	Dere14g0267		Pkinase	7.8e-31	CL0016

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Event-related genes

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Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Dere03g1153	03	18594427	18596246	Dere14g0267	14	2811091	2812764	CCT
	Dere14g0267	14	2811091	2812764	Dere14g0267	14	2811091	2812764	ECH

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