Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere14g0253 ATGGGGTGGATCGGAGACACTGTTGACTCCGTCAAGTCCATTCAACTGAGACAAGCTCTAACCCAGGTCGTCAATCTTGGCTTGATTGTGTCATCAGCACTAATGATTTGGAAAGGATTAATGTGTATAACTGGCAGTGAATCACCTGTTGTTGTTGTGCTTTCCGGAAGCATGGAACCTGGTTTCAAGAGAGGTGATATTTTGTTTTTGCATATGAGCAAGGATCCCATTCGTACTGGAGAGATAGTTGTTTTCAATATAGATGGACGTGATATTCCAATTGTCCACCGGGTAATTAAGGTTCATGAACGTCAAGAGACTGGAGAAGCTTATATCCTCACCAAAGGAGACAATAACGATATGGATGATAGGGTTTTGTACAATCATGGTCAGCATTGGCTGCAGAAACACCATATAATGGGCAGAGCTGTTGGGTTCTTACCTTATGTTGGTTGGGTAACAATACTGATGACCGAAAAGCCTGTGTTGAAGTACATACTCATCGGGGCGTTGGGACTGCTGGTGATAACATCAAAGGATTAG 543 0.4309 MGWIGDTVDSVKSIQLRQALTQVVNLGLIVSSALMIWKGLMCITGSESPVVVVLSGSMEPGFKRGDILFLHMSKDPIRTGEIVVFNIDGRDIPIVHRVIKVHERQETGEAYILTKGDNNDMDDRVLYNHGQHWLQKHHIMGRAVGFLPYVGWVTILMTEKPVLKYILIGALGLLVITSKD 180
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere14g0253 180 CDD S26_SPase_I 49 143 IPR019533 GO:0004252|GO:0006465
Dere14g0253 180 FunFam Signal peptidase complex catalytic subunit SEC11 49 153 - -
Dere14g0253 180 NCBIfam signal peptidase I 30 176 IPR001733 GO:0006465|GO:0008233|GO:0016020
Dere14g0253 180 Pfam Peptidase S24-like 37 144 IPR015927 -
Dere14g0253 180 Gene3D Umud Fragment, subunit A 39 148 - -
Dere14g0253 180 PRINTS Eukaryotic signal peptidase (S26B) family signature 112 123 IPR001733 GO:0006465|GO:0008233|GO:0016020
Dere14g0253 180 PRINTS Eukaryotic signal peptidase (S26B) family signature 53 68 IPR001733 GO:0006465|GO:0008233|GO:0016020
Dere14g0253 180 PANTHER SIGNAL PEPTIDASE COMPLEX CATALYTIC SUBUNIT SEC11 15 179 IPR001733 GO:0006465|GO:0008233|GO:0016020
Dere14g0253 180 SUPERFAMILY LexA/Signal peptidase 35 146 IPR036286 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere14g0253 Dere-ChrDere14 2630046 2634846 Wgd