Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere14g0229 ATGTCGAGCTGCAGCGTCGATGTTGCCCCTGAGCAACTCTGCTACATCCCTTGCAACTTTTGCAACATTGTTCTTGCGGTGAGTGTTCCATGCAGTAGCCTATTTGACATAGTGACCGTTCGATGTGGGCACTGCAGCAATCTATGGTCAGTGAACATGGCTGCTGCGCTTCAGTCACTGTCATGGCAAGATGTTCAGGCATCTGGCTACACCAATCCGGAGTATAGAATTGACACAGGCTCCTCTTCCAAATGCAACAATAATATGATTGCAATGAGAGCACCCACCAACCATGTAACTCAGGAGAGGATTGTGAACAGACCTCCCGAGAAGAGGCAGCGCGTACCTTCTGCATATAATCAGTTCATAAAGGAAGAGATTCAGAGGATCAAGGCTAACAATCCAGATATCAGTCACAGGGAAGCATTCAGTACAGCTGCAAAGAACTGGGCACACTTCCCTCATATTCATTTTGGGCTGATGCTGGAAACCAACAATCAAGCTAAGATGGAGAATGGCACTGAGAAGCATTTAATGTCAAGGGCAGCATTTTTGAACAAATGA 564 0.4645 MSSCSVDVAPEQLCYIPCNFCNIVLAVSVPCSSLFDIVTVRCGHCSNLWSVNMAAALQSLSWQDVQASGYTNPEYRIDTGSSSKCNNNMIAMRAPTNHVTQERIVNRPPEKRQRVPSAYNQFIKEEIQRIKANNPDISHREAFSTAAKNWAHFPHIHFGLMLETNNQAKMENGTEKHLMSRAAFLNK 187
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere14g0229 187 CDD HMG-box_SF 114 150 - -
Dere14g0229 187 SUPERFAMILY HMG-box 104 153 IPR036910 -
Dere14g0229 187 Gene3D High mobility group box domain 98 157 IPR036910 -
Dere14g0229 187 PANTHER PROTEIN YABBY 6-RELATED 1 170 IPR006780 GO:0007275
Dere14g0229 187 FunFam Axial regulator YABBY 105 176 - -
Dere14g0229 187 Pfam YABBY protein 9 160 IPR006780 GO:0007275
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere14g0229 Dere-ChrDere14 2390929 2394547 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere14g0229 8 170 C2C2-YABBY Transcription Factor Family AT2G26580 78.528 1.34e-91 263
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-YABBY Dere14g0229 YABBY 6.6e-70 CL0114