Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere14g0213 ATGTTACTTGTCACATCCCTGACCCTAGAAGAAGGATATTGGAAACTAAGTTATCTCATGGAAAGTAAAGAACTGGTACTAAAGCCACAGCCCAAAAAGAATCTATGGAAGCCTGAGGAAGATCTTGTTCTGAAAACCTACATTGAAGCTCACGGTGAAGGAAACTGGGAAGCTGTGTCCAAAAATTCAGGGCTGAAGAGAGGAGGGAAGAGTTGCAGGCTAAGATGGAAGAACTATCTGAGACCTGATATTAAACGTGGAGGAATGTCTGAAGAGGAGGAAGACCTTATCATCAGACTGCATAAGCTTCTTGGCAACCGATGGTCCCTGATAGCCGGAAGGCTTCCTGGAAGAACAGATAACGAAGTGAAGAACTACTGGAATATCCATTTGAACAAGAGATGCCCTCGAGGCAAAAGGAAAGTCACCGATTTAAACAACGATCACCAAGAAACCAACAAGAAATCACGGACCAGTAATTCTGACTTTCCGATTTCCACAAGCATTGCAGAAACAGGATTATTGGATGCGAGGAAAGAAGAGAGCAGTAACATTACAAACTCTTGGATAGACGAAACGCACTGTGACCTGGATTTTCCGATTGTGCCTGGAAACAGTGCGGTATTTGGTTTTGATGATGAGCCTTTCATGACAAACTTGGATCCTGTTGTCTTGTTTGAAACTGAGGCTTTAGACTACGGATGGTTGGAGTCCAATTCGCACACGCAATGGATCATGCCATAA 744 0.4355 MLLVTSLTLEEGYWKLSYLMESKELVLKPQPKKNLWKPEEDLVLKTYIEAHGEGNWEAVSKNSGLKRGGKSCRLRWKNYLRPDIKRGGMSEEEEDLIIRLHKLLGNRWSLIAGRLPGRTDNEVKNYWNIHLNKRCPRGKRKVTDLNNDHQETNKKSRTSNSDFPISTSIAETGLLDARKEESSNITNSWIDETHCDLDFPIVPGNSAVFGFDDEPFMTNLDPVVLFETEALDYGWLESNSHTQWIMP 247
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere14g0213 247 PANTHER TRANSCRIPTION FACTOR MYB8-RELATED-RELATED 28 170 - -
Dere14g0213 247 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 28 80 IPR017930 -
Dere14g0213 247 MobiDBLite consensus disorder prediction 139 156 - -
Dere14g0213 247 SMART sant 32 82 IPR001005 -
Dere14g0213 247 SMART sant 85 133 IPR001005 -
Dere14g0213 247 MobiDBLite consensus disorder prediction 139 163 - -
Dere14g0213 247 CDD SANT 89 131 IPR001005 -
Dere14g0213 247 Gene3D - 89 162 - -
Dere14g0213 247 Pfam Myb-like DNA-binding domain 34 80 IPR001005 -
Dere14g0213 247 Pfam Myb-like DNA-binding domain 86 128 IPR001005 -
Dere14g0213 247 FunFam MYB-related transcription factor 32 85 - -
Dere14g0213 247 CDD SANT 36 80 IPR001005 -
Dere14g0213 247 Gene3D - 33 85 - -
Dere14g0213 247 ProSiteProfiles Myb-like domain profile. 81 131 IPR001005 -
Dere14g0213 247 ProSiteProfiles Myb-like domain profile. 28 80 IPR001005 -
Dere14g0213 247 SUPERFAMILY Homeodomain-like 32 127 IPR009057 -
Dere14g0213 247 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 81 135 IPR017930 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere14g0213 Dere-ChrDere14 2221098 2222693 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere14g0213 20 209 MYB Transcription Factor Family AT5G52600 52.500 2.78e-62 192
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Dere14g0213 Myb_DNA-binding 2.2e-11 CL0123