Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere14g0160 ATGGGTAAGGAAAAAAAACAAATAGGAGAAAAATCAAGTGACAGTAGTAGAAATCAAAGTAAAGTGGGAGATAATAGCTCTAAAGCATATGATAAGGATACTAAGGTATTTATATCCATGTCTCAAGAGTTGAAGGATGAAGGGAACAAGCTGTTCCAAAAGAGAGACCACGAAGGAGCTATGGTAAAATATGAGAAATCCCTCAAATTGCTTCCAAGAAATCATATAGATGTACCCAGTCTGCGGAGTAACATGGCTGCATGCTACATGCAGATGGGACTCAGTGAGTATCCAAGGGCCATTCATGAATGCAATTTGGCTCTTGAAGTTACACCCAAGTACAGTAAAGCCATTTTGAAAAGGGCAAGGTGCTATGAGGCTTTAAATAGGCTGGATTTAGCTCTGAGAGATGTTAGTACCGTTTTGAAGATAGAACCAAATAATATCATGGCATTGGAAATTTCAGAAAGGGTGAAAAATGCACTTGAGGAGAAGGGGTTAAAAGTAGCTGACACAGTAATTGAGTTGCCTCCAGATTATGTTGAACCTTCTTATGTGCCTCCAGAAGGAATAGTAAAAGAGAAGACACGCAAGAAGAAGAGCAAAAAGGTTGAGCTGATGGCTGCTGGTAATACAGTTGCAGAAAAGCAAGCTGAGGAGAAGTTGGAAGATAAGAAGGCTGAGGACAGTGTTGAGGAGAAGAAGACTGTGATCAAATCCGAAGAGAAGGTGGCCAAAGAAAAGATTGATGGGAAGAAGGCTGATGTAAAAGAGGTTGTTGAGGAAAAAGTCAATGATAGAAGTAAAGATGCAGCTAAGAAAACAGTGAAACTTGTTTTTGGTGAGGATATTCGATGCGCAGAATTGCAAGTTAATTGCAGCCTCCAGCAGCTAAGGGAAGTTATCAGTGACCGATTTCCAAGCCTAGGAGCAGTTCTTGTCAAATACAGGGACCAAGAAGGTGATTTAGTGACAATCACTTCTGACGAAGAATTAAGATGGGCTGAAAAATCAGCAGGATGTCAGAGTTCTATCCGTCTGTACATAGTGGATGCTGATCCTGAGCAGGATCCATTCTTTGAGAAAATTAATGAAAAGAAGGAGCAAAAGGCTGACATTAATAATGCACTTGAGAATGGTTACGCAGTTAAAGAAAAGGAAATGATTAGTTCATCTTGCATTGAGGATTGGATAATCCAGTTTGCCCAACAGTTCAAGAACTATGTTGGATTTGAATCTGACAGATATTTAGATTTTCATGAACTTGGAATGAAGCTCTATTCTGAGGCAATGGAGGAGACAGTTACAAGTGAAGTAGCACAAGGCCTATTTGACATGGCAGGAGCTAAGTTCCAAGAGATGGCTGCTCTAGCATTGTTCAACTGGGGAAATGTTCACATGTCCAGGGCAAGGAAGAAAATGAATATCACAGAAGAGTCTTCCAAAGAGCATCTATATGAACAAATAAAAAATTCATATGAATGGGCACAGAAAGAATATAAAAGAGCAGGAGAAAAATATGAAGCAGCCATTAAAATAAAATCAGATTTTTATGAAGGCTTCCTGGCACTAGGACAACAGCAGTTTGAGCAAGCAAAACTTTCTTTCTATTATGCGATCAGCAGTAATGTTGAGTTATCAACATGGCCCTCTGCAGAAGCTCTTCAACTTTACAACAGTGCAGAGGAAAACATGGAGAAAGGAATGCAGATATGGGAAAAATCAGAAGAGCGACACTTGAGTGAAGTCTCTAAATCCACGGATGTCAAATTACATTTGCAGAATATGGGATTGGATGGGCTATTTCAAAATATATCATCAGAGGAAGTTGGAGCACGTGCAGCAAATTTGAGGTCTCAAATTAATATCCTTTGGGGCACCATGCTATATGAGCGTTCCATTATGGAATTCAAATTAGGGCTTCCAATATGGCACGAATGTCTGGAAGTTGCAGTTGAAAAGTTTGAACTTGCTGGAGCTTCTCCAACAGATATAGCTGTAATGTTGAAGAACCACTGTTCAAATAATACTGGTGCTGAAGGTCTAGGATTCAACATCGATGAAATAGTACAGGCATGGAATGAAATGTATGAAGCTAGAAGGTGGCAGAGTCAAGTTTCATCATGTCATTTGGAACCCTTATTCAGAAGGCGAGTTCCAAAAATTTATCATGCCTTAGAGCTTGCATGA 2190 0.3968 MGKEKKQIGEKSSDSSRNQSKVGDNSSKAYDKDTKVFISMSQELKDEGNKLFQKRDHEGAMVKYEKSLKLLPRNHIDVPSLRSNMAACYMQMGLSEYPRAIHECNLALEVTPKYSKAILKRARCYEALNRLDLALRDVSTVLKIEPNNIMALEISERVKNALEEKGLKVADTVIELPPDYVEPSYVPPEGIVKEKTRKKKSKKVELMAAGNTVAEKQAEEKLEDKKAEDSVEEKKTVIKSEEKVAKEKIDGKKADVKEVVEEKVNDRSKDAAKKTVKLVFGEDIRCAELQVNCSLQQLREVISDRFPSLGAVLVKYRDQEGDLVTITSDEELRWAEKSAGCQSSIRLYIVDADPEQDPFFEKINEKKEQKADINNALENGYAVKEKEMISSSCIEDWIIQFAQQFKNYVGFESDRYLDFHELGMKLYSEAMEETVTSEVAQGLFDMAGAKFQEMAALALFNWGNVHMSRARKKMNITEESSKEHLYEQIKNSYEWAQKEYKRAGEKYEAAIKIKSDFYEGFLALGQQQFEQAKLSFYYAISSNVELSTWPSAEALQLYNSAEENMEKGMQIWEKSEERHLSEVSKSTDVKLHLQNMGLDGLFQNISSEEVGARAANLRSQINILWGTMLYERSIMEFKLGLPIWHECLEVAVEKFELAGASPTDIAVMLKNHCSNNTGAEGLGFNIDEIVQAWNEMYEARRWQSQVSSCHLEPLFRRRVPKIYHALELA 729
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere14g0160 729 ProSiteProfiles TPR repeat profile. 115 148 IPR019734 GO:0005515
Dere14g0160 729 Gene3D Tetratricopeptide repeat domain 39 169 IPR011990 GO:0005515
Dere14g0160 729 PANTHER PROTEIN CLMP1 3 727 IPR044517 -
Dere14g0160 729 SMART tpr_5 41 74 IPR019734 GO:0005515
Dere14g0160 729 SMART tpr_5 115 148 IPR019734 GO:0005515
Dere14g0160 729 SMART tpr_5 79 114 IPR019734 GO:0005515
Dere14g0160 729 CDD PB1 275 349 - -
Dere14g0160 729 ProSiteProfiles PB1 domain profile. 273 352 IPR000270 GO:0005515
Dere14g0160 729 Gene3D - 272 354 - -
Dere14g0160 729 ProSiteProfiles TPR repeat profile. 41 74 IPR019734 GO:0005515
Dere14g0160 729 SUPERFAMILY CAD & PB1 domains 274 363 - -
Dere14g0160 729 SMART PB1_new 273 352 IPR000270 GO:0005515
Dere14g0160 729 Pfam PB1 domain 275 351 IPR000270 GO:0005515
Dere14g0160 729 SUPERFAMILY TPR-like 30 159 IPR011990 GO:0005515
Dere14g0160 729 MobiDBLite consensus disorder prediction 1 28 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere14g0160 Dere-ChrDere14 1676848 1679114 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere14g0160 24 148 Calmodulin-binding Proteins AT3G25230 28.358 2.07e-08 55.5
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere14g0160 14 1676848 1679114 Dere14g0160 14 1676848 1679114 ECH