Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere14g0144 ATGGCAAGTAATGGTACTGAAAATGTCCCTAGCAATACTGTTACTGAAGGTTCAGAAACCACCATTGAGATAAAGATTAAAACATTGGATTCACAAACTTATACTCTCAAAGTGGATAAACAGATGCCAGTTCCTGCTTTGAAAGAACAGATTGCTTCTGTAACCGGAGTGTTGTCAGAGCGACAGCGTTTAATTTGTCGAGGAAAAGTTCTAAAGGATGATCAACTCCTTTCTGCCTATCATGTTGAAGATGGTCATACCTTGCATCTGGTTGTCAGGCAACCTGATCTAGCTGGAAGTTTGCCCAATCATTCAGTAACTGACCCACATTCAAGCACTAGCAATAGTCACAGTAATCAAGTAGCTCCTGGTGTTTTTATTGAAACTTTTAATGTGCCTGTTCAGGGAGATGGAGTTCCTCCAGAAGTCAATAGGATCATTTCTGCTATTCTAGGATCTATTGGAATTTCAAATTTTGCAAGTGGTGGTGAAGGGATTGATGTCAGGGGGCATGATTCCCAAGGGTTTGGAAGAACATCAGGTTCTAGTGGCTTATCAGATTTCTTTCATCCTCAACCTGAACAAGCTGGTTTGCGGAATTCATCTGATAGATTGCGTAATACATTTGGACTTCCAACAACAGCTACCTCTTTGGGATCTTTACAGCCTCCTGTCATTCCTGATTCCTTGACAACTTTGTCCCAGTATCTGAGTCATCTAAGGCATGAATTTGAAGCCATTGTGAGAGAAGGGGGAAATAATATGCAACCAGCTGAGGCTGAGAGGAATGGAGAAGGATCCATTTCTTCTTCACCTTCAGGTTCTACTCCAGAAGGGCTCTTGTCACCTGCATACTTGGCAGAAGTCTTGCATTCTACCAGACGAATGTTCATTGAACAGGCTGGAGAGTGTATATTTCAACTTGCTACACAACTTGAGAATCAAGCAAATGTGACTGATCCCTTGTTGCGGTCAAGCACTCAGTCCACGGCTTGGAGGACTGGAGTTCTGTTTTACAATCTTGGTGCTTTTCTACTTGAGCTTGGTCGTACAACCATGGCATTACGTTTGGGTCAAACACCGTCTGAAGCTGTAGCTAATGGCGGACCAGCAGTTTTTATATCCTCATCTGGTCCTAATCATATCATGGTTCAGCCTCTTCCTTTTCAACCTGGAGCAAGCTTTGGTGCTGCCCCTGTTGGAACTGTGCAGTCCCCTTCTGGTTTAGGTAGTGGACTTGGCTCAAGTTTTTACCCTAGGCGTATAGACATACAGATACGGCGAGGCACATCAGCATCCTCAACTAATGTCAACCGAGAAGAACATGGTGAGACACAGTCTGCCTCAGTACAAAGAAATCCAGTTGAAATTTCTGTTAATCAGACAAGCTCAAGACTTCCAGAGGATTTATCTTTTGCTGGGGAGTCAGGAGTACGGATAGTCCCAATTAGAACCATGGTTGCAGCAGTGCCTAGCCCCTTAGGTCGAACACCTTCAGAATCTTCTGGTAATTCTATAGGGCTGTACTATCCAGTTATTGGGAGATTTCAGCAGGTGCCTTCGGGACATGGGAATAGTGATTCAGGATCTCAGCCGTCAAGTCAGCATAATGCTTCTAGTCTTCATGCTGTGCAACAGTCAATTCCGGAATCTACCGAGCAAAGGCAAAGCATGGATGATCCTGTAAGAAATGGATCCTTATCAACTCCTAGCTTAAGACAAGAGCCATCTAATACCCGCAGGGTGAACATTAATATTCTGACAGCTGGTGGACTTCAAAACAACCAAGAATCTGAGAGGCAGATACCAAATAATGTGCTTCAGTTTATAAGGGCACTCTTTCCTGGTGGTGAAATTCATGTTGAAGATCCCAGTTCACAGGGAACAACTGCTGGTCCTACCTCAGATCATGCTGGAACATCAATAGATGCTGCTCAGGCCCCTGAGTCAGAACCCAGAGTTAGTGAGGAAGGAATATTCTTGTCTAATTTACTTCGTGAAGTTATGCCCCACATATCTCAACAAGCAGGGTCTGGGACACATGTAACCCCTCGAGGTGAAAATGCCTCGGACGATCAAACAGCTTCTGATTCTTCTACCCAGGGTGGGACATCACGTAGACAGAGTGATTCTGAGCCAATCCCTCCTAATCCAAAACGTCAAAAGATGGAGTGA 2175 0.4428 MASNGTENVPSNTVTEGSETTIEIKIKTLDSQTYTLKVDKQMPVPALKEQIASVTGVLSERQRLICRGKVLKDDQLLSAYHVEDGHTLHLVVRQPDLAGSLPNHSVTDPHSSTSNSHSNQVAPGVFIETFNVPVQGDGVPPEVNRIISAILGSIGISNFASGGEGIDVRGHDSQGFGRTSGSSGLSDFFHPQPEQAGLRNSSDRLRNTFGLPTTATSLGSLQPPVIPDSLTTLSQYLSHLRHEFEAIVREGGNNMQPAEAERNGEGSISSSPSGSTPEGLLSPAYLAEVLHSTRRMFIEQAGECIFQLATQLENQANVTDPLLRSSTQSTAWRTGVLFYNLGAFLLELGRTTMALRLGQTPSEAVANGGPAVFISSSGPNHIMVQPLPFQPGASFGAAPVGTVQSPSGLGSGLGSSFYPRRIDIQIRRGTSASSTNVNREEHGETQSASVQRNPVEISVNQTSSRLPEDLSFAGESGVRIVPIRTMVAAVPSPLGRTPSESSGNSIGLYYPVIGRFQQVPSGHGNSDSGSQPSSQHNASSLHAVQQSIPESTEQRQSMDDPVRNGSLSTPSLRQEPSNTRRVNINILTAGGLQNNQESERQIPNNVLQFIRALFPGGEIHVEDPSSQGTTAGPTSDHAGTSIDAAQAPESEPRVSEEGIFLSNLLREVMPHISQQAGSGTHVTPRGENASDDQTASDSSTQGGTSRRQSDSEPIPPNPKRQKME 724
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere14g0144 724 MobiDBLite consensus disorder prediction 618 655 - -
Dere14g0144 724 Gene3D - 15 116 - -
Dere14g0144 724 MobiDBLite consensus disorder prediction 623 641 - -
Dere14g0144 724 CDD Ubl_ubiquitin_like 24 91 - -
Dere14g0144 724 PANTHER LARGE PROLINE-RICH PROTEIN BAG6 9 723 - -
Dere14g0144 724 Pfam Ubiquitin family 24 94 IPR000626 GO:0005515
Dere14g0144 724 ProSiteProfiles Ubiquitin domain profile. 22 97 IPR000626 GO:0005515
Dere14g0144 724 MobiDBLite consensus disorder prediction 428 454 - -
Dere14g0144 724 MobiDBLite consensus disorder prediction 674 715 - -
Dere14g0144 724 MobiDBLite consensus disorder prediction 263 278 - -
Dere14g0144 724 MobiDBLite consensus disorder prediction 253 279 - -
Dere14g0144 724 MobiDBLite consensus disorder prediction 100 120 - -
Dere14g0144 724 FunFam Large proline-rich protein BAG6 14 107 - -
Dere14g0144 724 MobiDBLite consensus disorder prediction 674 724 - -
Dere14g0144 724 SMART ubq_7 22 93 IPR000626 GO:0005515
Dere14g0144 724 MobiDBLite consensus disorder prediction 519 580 - -
Dere14g0144 724 SUPERFAMILY Ubiquitin-like 17 98 IPR029071 -
Dere14g0144 724 PRINTS Ubiquitin signature 74 95 IPR019956 -
Dere14g0144 724 PRINTS Ubiquitin signature 53 73 IPR019956 -
Dere14g0144 724 PRINTS Ubiquitin signature 32 52 IPR019956 -
Dere14g0144 724 MobiDBLite consensus disorder prediction 517 580 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere14g0144 Dere-ChrDere14 1519595 1528637 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere14g0144 22 93 Cytoplasmic Ribosomal Protein Gene Family AT3G52590 37.500 5.20e-09 53.5