Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere14g0141 ATGAGAGTTCGCCTTGACAAGTCTGTTTTCACTCTTTCCACTCGCACTATAATAGTACATACTACTATTACACATACACAGAACACTTCATCCTTTATTCCAACATATTCTCCAGAATCTTCTCTCTCTATAAGCCCCAAAATTATATCGAAGTCTCTTACTTTTCGTGCCAACAAGTTGCTGCTGAGCCGAACCACTACCATCACCACCGACTGTTGTTGTGACACCATGTGTGTACAGGACGCCGAGCAAGTTGGCGCAGATATGGAAAACCCAGATGATAGAAGGAAGTCTTGGCCTTTGCATTGTGACCTCTTGCATACCCACATGGAAAAGGAACCTCCTTTTAGAACTTCCGGCGATCGGAATATCGGTGCTGGGAATTCGCTTCCTCTGGAAAGCATAAGTGAGGACACAGTGATTGCTGACAAAAAACAGAACCAGATGAACTTTGTTCCTGCTTTGCGATCTGGAGAATGGTCAGACATTGGAGGTCGCCGTACTATGGAAGATACCCACATCTGCATTGGAGACTTAGGAAAGAAGTTTGGTTATGATGTACTCAGTGAGGAAGCTGTTTCGTTTTATGGGGTATTTGATGGACATGGAGGGAAGAGTGCTGCACTATTTGTTCGTGATCATCTTCCAAGAGTGATTATTGAGGATGCCGAGTTTCCTTTGGAGCTAGAGAAGGTGGTCACAAGGTCATTTTTACAGACAGATGCTGCATTTGCAGAGACATGCACTCTTGAGTCTTCCTTGTCTTCGGGTACAACTGCATTAACTGCTATTATATTTGGAAGGTCTTTGCTTGTAGCCAATGCTGGAGACTGCAGGGCTGTTTTGTCCCGATGTGGAAGGGCAATAGAAATGTCCAAAGACCATAAGCCCTTCTGCATCAAAGAGAGGAAGCGAATTGAGTCTCTAGGTGGATTCGTTGATGATGGTTATCTGAATGGTCAGTTAGGTGTTACTCGGGCACTAGGCGACTGGCATCTTGAAGGCATGAAAGAAATGAGTGAAAGGGGAGGACCATTAAGCGCTGAGCCAGAACTCAAATTGGTGACACTGACCAGAGAAGATGAGTTTTTGATAATTGGAAGTGATGGAATCTGGGATGTTTTCAGCAGCCAATATGCTGTAGATTTTGCCAGGAGAAGGCTTCAAGTGCATAATGATGTGAAACTTTGCTGTAAGGAGATAGTGGAGGAAGCCATAAACAGAGAATCAACAGATAACTTAACAGTTGTGATGGTGTGTTTTCACTCAGAACCACCACCACCTGTTGTTGTGGAGAGGGCAAGAGTCAGGAGAAGCATATCTGCTGAGGGACTTCAGAATCTCAAGTTCTTCCTGGAAGGATAG 1365 0.4447 MRVRLDKSVFTLSTRTIIVHTTITHTQNTSSFIPTYSPESSLSISPKIISKSLTFRANKLLLSRTTTITTDCCCDTMCVQDAEQVGADMENPDDRRKSWPLHCDLLHTHMEKEPPFRTSGDRNIGAGNSLPLESISEDTVIADKKQNQMNFVPALRSGEWSDIGGRRTMEDTHICIGDLGKKFGYDVLSEEAVSFYGVFDGHGGKSAALFVRDHLPRVIIEDAEFPLELEKVVTRSFLQTDAAFAETCTLESSLSSGTTALTAIIFGRSLLVANAGDCRAVLSRCGRAIEMSKDHKPFCIKERKRIESLGGFVDDGYLNGQLGVTRALGDWHLEGMKEMSERGGPLSAEPELKLVTLTREDEFLIIGSDGIWDVFSSQYAVDFARRRLQVHNDVKLCCKEIVEEAINRESTDNLTVVMVCFHSEPPPPVVVERARVRRSISAEGLQNLKFFLEG 454
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere14g0141 454 Pfam Protein phosphatase 2C 165 413 IPR001932 -
Dere14g0141 454 ProSiteProfiles PPM-type phosphatase domain profile. 156 421 IPR001932 -
Dere14g0141 454 PANTHER PROTEIN PHOSPHATASE 2C 143 419 IPR015655 GO:0004722|GO:0006470
Dere14g0141 454 CDD PP2Cc 156 421 IPR001932 -
Dere14g0141 454 SUPERFAMILY PP2C-like 149 423 IPR036457 -
Dere14g0141 454 ProSitePatterns PPM-type phosphatase domain signature. 195 203 IPR000222 GO:0043169
Dere14g0141 454 Gene3D - 136 425 IPR036457 -
Dere14g0141 454 SMART PP2C_4 146 419 IPR001932 -
Dere14g0141 454 FunFam Probable protein phosphatase 2C 22 140 424 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere14g0141 Dere-ChrDere14 1492597 1500863 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere14g0141 145 454 PP2C-type Phosphatase Gene Family AT2G25620 62.420 7.10e-139 402
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF DBP Dere14g0141 PP2C 1e-68 CL0238
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere14g0141 14 1492597 1500863 Dere14g0141 14 1492597 1500863 ECH