Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere14g0132 ATGGCTGGAATGCTTCCTGGTGTAGAGTGTGCTCGAAGGAGAAGGTTCCATCAGAGTGGAGGATGGTCTGATTCACCCACCTCCATGGCTCCTCATTCCTCCACCAGGCGCTCTTCTTTCTGTTTGTACACTAGCAACCATGAATCTCTTTCTTCTTCCTCTTTACTGCAAAGAAGCCTATTATACCAGGCATACCCACAAGCGATGCTGGGAGGTGCTGCTAGAGAAGCCAAGGAGAGATTGGATGAGAGATTGAGAGCACAAAGGAAACCAGAAAACAGAAGTAATCAAAACAGCAGCAAAGAGAAGTTGAGAAGTACAGAGGCAGAGTTGCAGATAGAGGTATATGGGACAAAGAGAAGTGGAAGCAGAAGGTTCAGTTGGAGCAAATTGGGATGGAAGGCCTCAGAACAAGAGGACTGTGCAGTGTGCTTGGAGACATTCAAGCATGGAGACACACTGATACACCTGCCTTGTGCCCATAGGTTCCATTCAAGGTGCTTGGAGCCATGGCTAGAAAACAATGCTCAGTGCCCATGTTGCAGAATGACCATCATCTCTCACTAG 567 0.478 MAGMLPGVECARRRRFHQSGGWSDSPTSMAPHSSTRRSSFCLYTSNHESLSSSSLLQRSLLYQAYPQAMLGGAAREAKERLDERLRAQRKPENRSNQNSSKEKLRSTEAELQIEVYGTKRSGSRRFSWSKLGWKASEQEDCAVCLETFKHGDTLIHLPCAHRFHSRCLEPWLENNAQCPCCRMTIISH 188
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere14g0132 188 MobiDBLite consensus disorder prediction 85 106 - -
Dere14g0132 188 PANTHER RING FINGER AND PROTEASE ASSOCIATED DOMAIN-CONTAINING 50 183 - -
Dere14g0132 188 Pfam Ring finger domain 140 182 IPR001841 -
Dere14g0132 188 FunFam Zinc finger family protein 115 187 - -
Dere14g0132 188 SUPERFAMILY RING/U-box 131 186 - -
Dere14g0132 188 CDD RING-H2_PA-TM-RING 140 182 - -
Dere14g0132 188 ProSiteProfiles Zinc finger RING-type profile. 141 182 IPR001841 -
Dere14g0132 188 SMART ring_2 141 181 IPR001841 -
Dere14g0132 188 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 122 187 IPR013083 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere14g0132 Dere-ChrDere14 1442671 1443707 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere14g0132 1 86 C3H Transcription Factor Family AT2G15580 51.546 1.32e-19 78.2
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere14g0132 14 1442671 1443707 Dere14g0132 14 1442671 1443707 ECH