Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere14g0127 ATGGCTTTTCACGACCATCTTCCTCAAGAACTGGCCTTTCAGCCTTTCACGGATGAGCAGCACTTAAGTCAAAACAGGGACATGCAAAGGATGCTGCCGTTCTCCACCGCCGCCGGAGGAGGCCCGGCGCCGACGTGGCTCGGCAATACGGTTGGTACTCTCCGGCAGCAGAATTTCCTCCACTTACAATCCGACTCGGCCGATGATGCCCGGGGGAATATGATGCCGTCTGAGAGGAGCAACGATCGCAGCGGCGGCGATCGAAACCGAGCCGACGGCAATTGTGAATCGGAGGATTTGGCAGAGTACAAAGCTGACATTCTGGGACACCCTCTTTACGACCAGCTCTTGTCTGCTCACGTGTCGTGTTTAAGGATTGCCACTCCGGTGGACCAGCTGCCTAGGATCGATGCACAGCTTCAACAGTCACAGCGCGTGCTGGAAAAGTACTCTGGTATTGGAAATGGGGTTGTAGATGAGAAGGAGCTTGATCAGTTCATGACGCATTATGTTCTATTGCTCTGCGCCTTTAAAGAACAACTGCAACAACATGTCCGAGTTCATGCCATGGAAGCAGTGATGGCTTGTTGGGAGCTTGAGCAGTCTCTACAGAGCTTGACTGGTGTGTCTCCCGGAGAAGGGACAGGAGCAACAATGTCGGACGATGAAGATGAGCAGGTAGAGAGCAACGCCAACCTATATGAAGGTGGGTTCGATGGTGCTGACAGCCTTGGCTTTGGTCCTCTTGTTCCCACTGAAAGTGAAAGATCTTTGATGGAGCGTGTGAGGCAGGAGTTGAAGCATGAGCTGAAGCAGGGTTACAAAGAGAAGATTGTAGACATACGAGAGGAGATTCTGCGAAAGAGGCGTGCAGGGAAGCTCCCGGGAGACACCACCTCTCTCTTAAAAGCTTGGTGGCAATCACATTCCAAATGGCCTTATCCCACTGAGGAAGACAAGGCAAGGTTGGTGCAGGAAACAGGCTTGCAACTAAAGCAAATAAATAACTGGTTCATTAATCAAAGGAAAAGGAATTGGCACACTAATCCTTCATCTTCTACTTCCTCTAAAAGCAAGCGCAAGAGTAGTGCAGGTGAAACCAGTAACCAGAGCTTCATGTGA 1122 0.5089 MAFHDHLPQELAFQPFTDEQHLSQNRDMQRMLPFSTAAGGGPAPTWLGNTVGTLRQQNFLHLQSDSADDARGNMMPSERSNDRSGGDRNRADGNCESEDLAEYKADILGHPLYDQLLSAHVSCLRIATPVDQLPRIDAQLQQSQRVLEKYSGIGNGVVDEKELDQFMTHYVLLLCAFKEQLQQHVRVHAMEAVMACWELEQSLQSLTGVSPGEGTGATMSDDEDEQVESNANLYEGGFDGADSLGFGPLVPTESERSLMERVRQELKHELKQGYKEKIVDIREEILRKRRAGKLPGDTTSLLKAWWQSHSKWPYPTEEDKARLVQETGLQLKQINNWFINQRKRNWHTNPSSSTSSKSKRKSSAGETSNQSFM 373
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere14g0127 373 Pfam KNOX2 domain 158 207 IPR005541 GO:0003677|GO:0005634
Dere14g0127 373 ProSiteProfiles ELK domain profile. 265 285 IPR005539 GO:0003677
Dere14g0127 373 PANTHER HOMEOBOX PROTEIN TRANSCRIPTION FACTORS 109 361 - -
Dere14g0127 373 SMART HOX_1 287 352 IPR001356 GO:0003677
Dere14g0127 373 FunFam homeobox protein knotted-1-like 3 isoform X1 286 347 - -
Dere14g0127 373 Pfam Homeobox KN domain 305 344 IPR008422 GO:0003677|GO:0006355
Dere14g0127 373 MobiDBLite consensus disorder prediction 64 94 - -
Dere14g0127 373 SMART KNOX1_2 101 145 IPR005540 GO:0003677|GO:0005634
Dere14g0127 373 Pfam KNOX1 domain 103 144 IPR005540 GO:0003677|GO:0005634
Dere14g0127 373 CDD homeodomain 288 349 IPR001356 GO:0003677
Dere14g0127 373 SUPERFAMILY Homeodomain-like 287 352 IPR009057 -
Dere14g0127 373 ProSiteProfiles 'Homeobox' domain profile. 285 348 IPR001356 GO:0003677
Dere14g0127 373 SMART KNOX2_2 153 208 IPR005541 GO:0003677|GO:0005634
Dere14g0127 373 Gene3D - 291 368 - -
Dere14g0127 373 Pfam ELK domain 265 286 IPR005539 GO:0003677
Dere14g0127 373 SMART ELK_2 265 286 IPR005539 GO:0003677
Dere14g0127 373 MobiDBLite consensus disorder prediction 342 373 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere14g0127 Dere-ChrDere14 1398896 1403158 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere14g0127 1 361 Homeobox Transcription Factor Family AT5G25220 61.283 3.10e-171 482
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-KNOX Dere14g0127 KNOX2 2.7e-19 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere14g0127 14 1398896 1403158 Dere14g0127 14 1398896 1403158 ECH