Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere14g0117 ATGCTTTCCGTCCAACGGGAAAAGAACAACAAAAACACAATCAAATATACATATTTTTTTCACACTGACACACCATTTCCCTTTGCTAGTGTCCTTCCAACTGTCCCTCCCTCTTTCTCTTTCTCGTGTGTTCTTCAAGTTCCAATGGAGATTTTTAAATGCTTTTACTTCAGTTTTCTTCTTGCCATTTCTTCCATTTTCTTCTTGGCAGTTTCAGCAATCGACCCTTATTCAGAGGCACTCCTGAGCCTGAAATCTGAACTTGTGGATGATTATGACAGTTTACATGACTGGGTGGTGGTGCCTTCTGGAGGAAACTCAACTGGGAGATCCCATGCTTGTTGTTCTTGGTCCGGAATCAAGTGTGATAAGGACTCAAAAATTGTAACCTCCATAGACTTGTCCATGAAGAAACTGGGGGGTGTAATGTCAGGGAAGCAATTCAGTGTCTTCACAAAGCTTGAATATCTCAACCTGAGCCACAATTTCTTCTCAGGGGAGCTTCCTGTGGAAATGTTTAACCTCTCCAGCCTAAGAAGCTTGGATATAAGCAGAAACAATTTCTCTGGTCGCTTCCCAGGTGGGATTTCTAGCCTTGAAAACTTGCTTGTGCTTGATGCCTTTAGTAACAGCTTTTCTGGGCCATTGCCTGCTGAACTTTCCCAGCTTGAAAATCTCAAGGTTCTTAATCTAGCTGGGAGTTACTTCAAAGGACCAATCCCATCTGAATATGGTTCTTTCAGAAGCCTTGAGTTTCTTCATCTTGCAGGAAATCTTTTGTCAGGGAATCTTCCTTTAGAACTGGGTAATCTCAAAACAGTAACCCACATGGAAATTGGCTACAATTCCTATCAGGGTTTTATTCCTTCTGAATTAGGTAACATGAATGAACTTAGGTATCTTGATATTGCTGGTGCAAATTTATCTGGCCCAGTACCAAAGCAACTCTCCAATCTCACCAATTTGCAGTCACTTTATCTGTTCAGAAACCAGCTCACAGGATCAATACCAAGTGAGTTCAGCAAGATGAAGTCACTCACAAATTTAGATCTTTCTGACAATTTTATTTCTGGTTCCATTCCTGAAAGCTTCTCAGAGTTGGAGAACCTGAGGCTGCTCAGTCTCATGTACAATGACATGAATGGCACTGTTCCTGAAGGCATTGCACAACTTCCAAACTTAGAAACTCTTCTCATTTGGAACAATCAGTTCTCTGGGTCACTTCCACAGAGCTTGGGCAAGAACTCAGATCTCATGTGGGTGGATGTTTCCACAAACAATTTCGTAGGCAGCATACCACCAGACATTTGTGTGCGAGGAGTACTATACAAGCTGATTCTGTTTTCAAATAGATTCTCAGGTGGTCTCTCACCATCTCTCTCCAACTGTTCTTCACTTGTTCGTCTTCGCCTGGAAGATAACTTGTTCACAGGGAACATCCCTTTGACGTTCAGACATCTTCCTGATATCTCATATGTTGACCTCTCCAGGAACAAGTTTGTTGGTGGAATTCCCTCAGATATATCCCAAGCTATCAAGCTTACCTATTTCAATGTCTCTGATAATCCACTATTAGGTGGCACCATCCCTGCACAAACATGGTCTTTGCCACTTCTGCAAAATTTTTCAGCCTCTTCTTGTGGTATTTCAGGCAATCTTCCCCCATTTGAGTCCTGCAAATCAATCTCTCACATTGAGCTTGATAGGAATAACTTGTCTGGAATGATCCCAATTACTGTTTCAAATTGCCAAGCTCTTGAGAATATGAAATTATCCAACAATAATCTATCAGGTCATATACCTGAGGAACTTGCAAGCATCCCTGTTCTTGGTGTTGTAGACCTATCAAACAATAACCTCAGTGGCCCTATACCTGCAAAGTTTAGTACTTCTTCTAGTTTACGACTTCTTAATGTGTCTTTCAATTACATCTCTGGTTCAATTCCCGCAGGAAAGTTATTCAGATTTATGGATAGTAGTGCATTCGTTGGGAATCGTGAGCTTTGTGGAGCACCTCTACGACCATGTTCTGATTCAGTTGGAATATTGGGAAGTAAAGGCACATGGAAGCTTACAAGTATAGTGTTACTCTGTGCAGGATTGCTTATATTCCTCGCTGCAGCATTAGCTTTTGGAGTAGTTTATTTCAGACGGGGACTTAAAAGCCAATGGAAGATGGTCTCATTTGTTGGGCTCCCTCAGTTCACAGTGAATGATGTCTTGACAAGCTTCAATGCTTCAAGATCCCGAGAAGAAGTGGCAGCAGCACCATCACCATCAGTTTCAAAAGCGGTTCTACCTACAGGAATAACAGTTTTGGTGAAGAAGATTGAGTGGCAAAAGAGGAGCATTAAGGTGGTATCTGAGTTTATATTGCGACTAGGAAATGCAAGGCACAAGAATTTGATCAGATTACTAGGGTTTTGCTCCAACCAGAATCTAGCTTATCTTTTATATGATTACTTACCCAATGGGAATTTGGCAGAGAAAATTGGCATGAAATGGGCCTGGGCAGCTAAATTCAGAATTGTGGTTGGCATTGCCAGGGGACTTTGCTTCCTTCACCATGACTGTTACCCTGCCGTTCCTCACGGAGACTTGAAGTCTATCAATGTAGTATTTGATGAAAACATGGAACCCCACTTGGCAGAATTTGGGCTCAAGCATGTGTTAAAGTTAAGCAAAGGCTCATCTCCTGCCACAACTTTTAGCCGCGAAACAGAATATAATGAAGCCATGAAAGAGGAACTCTACGCTGATGTCTACAAATTTGGAGAGATGATTCTGGAGATTGTAACAAACGGAAGGTTGACAAATGTAGCAGCTAGCATACACAGCAAACCAAGGGAGGTTCTTCTGAGAGAAATTTACAATGAGAATGAAGTGAGTTCTGCTAGTTCATTGCAAGAGATAAAATTGGTTCTTGAAGTTGCTTTGCTTTGCACCAGAAGCAAGTCATCCGATCGCCCATCCATGGAAGATGCCTTAAAGCTTTTGTCAGGGTTAAAAGTTCCAGAAGATCACAAATATTAA 3033 0.4167 MLSVQREKNNKNTIKYTYFFHTDTPFPFASVLPTVPPSFSFSCVLQVPMEIFKCFYFSFLLAISSIFFLAVSAIDPYSEALLSLKSELVDDYDSLHDWVVVPSGGNSTGRSHACCSWSGIKCDKDSKIVTSIDLSMKKLGGVMSGKQFSVFTKLEYLNLSHNFFSGELPVEMFNLSSLRSLDISRNNFSGRFPGGISSLENLLVLDAFSNSFSGPLPAELSQLENLKVLNLAGSYFKGPIPSEYGSFRSLEFLHLAGNLLSGNLPLELGNLKTVTHMEIGYNSYQGFIPSELGNMNELRYLDIAGANLSGPVPKQLSNLTNLQSLYLFRNQLTGSIPSEFSKMKSLTNLDLSDNFISGSIPESFSELENLRLLSLMYNDMNGTVPEGIAQLPNLETLLIWNNQFSGSLPQSLGKNSDLMWVDVSTNNFVGSIPPDICVRGVLYKLILFSNRFSGGLSPSLSNCSSLVRLRLEDNLFTGNIPLTFRHLPDISYVDLSRNKFVGGIPSDISQAIKLTYFNVSDNPLLGGTIPAQTWSLPLLQNFSASSCGISGNLPPFESCKSISHIELDRNNLSGMIPITVSNCQALENMKLSNNNLSGHIPEELASIPVLGVVDLSNNNLSGPIPAKFSTSSSLRLLNVSFNYISGSIPAGKLFRFMDSSAFVGNRELCGAPLRPCSDSVGILGSKGTWKLTSIVLLCAGLLIFLAAALAFGVVYFRRGLKSQWKMVSFVGLPQFTVNDVLTSFNASRSREEVAAAPSPSVSKAVLPTGITVLVKKIEWQKRSIKVVSEFILRLGNARHKNLIRLLGFCSNQNLAYLLYDYLPNGNLAEKIGMKWAWAAKFRIVVGIARGLCFLHHDCYPAVPHGDLKSINVVFDENMEPHLAEFGLKHVLKLSKGSSPATTFSRETEYNEAMKEELYADVYKFGEMILEIVTNGRLTNVAASIHSKPREVLLREIYNENEVSSASSLQEIKLVLEVALLCTRSKSSDRPSMEDALKLLSGLKVPEDHKY 1010
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere14g0117 1010 Gene3D Ribonuclease Inhibitor 442 680 IPR032675 -
Dere14g0117 1010 FunFam Leucine-rich repeat receptor-like protein kinase 74 241 - -
Dere14g0117 1010 FunFam Leucine-rich repeat receptor-like protein kinase TDR 822 1007 - -
Dere14g0117 1010 FunFam Leucine-rich repeat receptor-like protein kinase TDR 735 821 - -
Dere14g0117 1010 Pfam Protein tyrosine and serine/threonine kinase 768 997 IPR001245 GO:0004672|GO:0006468
Dere14g0117 1010 Gene3D Ribonuclease Inhibitor 241 334 IPR032675 -
Dere14g0117 1010 Gene3D Ribonuclease Inhibitor 335 439 IPR032675 -
Dere14g0117 1010 SUPERFAMILY RNI-like 131 453 - -
Dere14g0117 1010 ProSiteProfiles Protein kinase domain profile. 747 1010 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere14g0117 1010 SMART serkin_6 747 999 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere14g0117 1010 FunFam Leucine-rich repeat receptor-like protein kinase TDR 242 344 - -
Dere14g0117 1010 SMART LRR_typ_2 343 366 IPR003591 -
Dere14g0117 1010 SMART LRR_typ_2 151 175 IPR003591 -
Dere14g0117 1010 SMART LRR_typ_2 391 415 IPR003591 -
Dere14g0117 1010 SMART LRR_typ_2 319 342 IPR003591 -
Dere14g0117 1010 SUPERFAMILY Protein kinase-like (PK-like) 749 999 IPR011009 -
Dere14g0117 1010 Gene3D Transferase(Phosphotransferase) domain 1 820 1009 - -
Dere14g0117 1010 Pfam Leucine rich repeat 320 379 IPR001611 GO:0005515
Dere14g0117 1010 FunFam Leucine-rich repeat receptor-like protein kinase TDR 364 678 - -
Dere14g0117 1010 ProSitePatterns Serine/Threonine protein kinases active-site signature. 862 874 IPR008271 GO:0004672|GO:0006468
Dere14g0117 1010 Pfam Leucine Rich Repeat 153 169 IPR001611 GO:0005515
Dere14g0117 1010 Gene3D Phosphorylase Kinase; domain 1 718 819 - -
Dere14g0117 1010 Gene3D Ribonuclease Inhibitor 76 240 IPR032675 -
Dere14g0117 1010 SUPERFAMILY L domain-like 360 669 - -
Dere14g0117 1010 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 250 1000 - -
Dere14g0117 1010 ProSiteProfiles Leucine-rich repeat profile. 345 367 IPR001611 GO:0005515
Dere14g0117 1010 Pfam Leucine rich repeat N-terminal domain 79 123 IPR013210 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere14g0117 Dere-ChrDere14 1302901 1306526 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere14g0117 66 1000 Receptor kinase-like Gene Family AT5G51350 56.600 0.0 1003
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Dere14g0117 PK_Tyr_Ser-Thr 6.9e-18 CL0016