Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere14g0091 ATGATTATGCAGCCCAGTAGCAGAGAAATGCAACAAGGGATCAACTCCCTCTTCAACTCTTCTCAAATCCCTCTTGAGGATCAGATCCAAGGCTCTCAGATGCATCATCCCCAACAACCCGAGCTTCACGACGATTTTCTCGAGCAAATGCTCTCCAACCTTCCTTCCTGCACCTGGCCCGACCTCAACCCCAAGCCCTTCTGGGACTCCAATCCCTCCGCCTCCGACGTCAAGCCCACCGACCTCTCCGACGAGTCCGCCCCCTCCAACGCTGATAATGCTGCGTTCCAGTACGATGACCAAGCGAACTTGGCCTCCAAGTTCCGGAACCACCAGATCAGTGGCAGCTCTCCGGCAGCCAAGTCCACCACGGCGGAGGCGGTGGCTCTGATGATTCAGCGCCAGCTTCTGATGTCTAGAGGAGTTATGGGAGCCGGCGATTCTGGGCTGCATCAGATGCCGTTGTCTCTGGGGGGCGGCGGAGGAAACTTCGAGCCTTCCCGGAAAGACTTTGTTGACGGGTCGTCGTTCAAATCTCACATTCCGACCGGTGAGGGTACTGTCCAAGCTCTGTACAACGGGTTCGCCGGAGCTATGCACGGCAACGGTCAAGCCTCGAACCACACTCAACATTTCCATCAGCCTCAGGGGCAGAATTATGGAGCTTCAGGGGCGGCGACGAACCAAGGTCCGGCGAACGGATCTCCAGCGCAGCCGAAGCAGAGGGTTAGGGCCAGGAGGGGTCAAGCCACGGACCCACACAGCATCGCTGAGAGGTTACGAAGGGAGAGAATCGCAGAGAGAATGAAGGCACTACAGGAACTGGTTCCCAATGCCAACAAGACAGACAAGGCGTCAATGCTGGACGAGATAATAGTCTATGTGAAGTTCTTGCAGCTGCAAGTGAAGGTTCTGAGCATGAGCAGATTGGGCGGTGCAGCTGCTGTTGCTCCTCTTGTTGCTGATATCTCCTCTGAGGGAGGAGGTGACTGCATCCAAGCCACCGCCAACGGCGGAGCCGGAGCCCCTCGGAACTCCAACGGCAACCAAACGGCGTCGTCCTCCAACGACACACTCACCATGACGGAGCACCAGGTGGCCAGGCTCATGGAGGAAGACATGGGCTCTGCCATGCAGTACCTTCAGGGCAAAGGTCTCTGCCTCATGCCCATATCCCTCGCCACCGCCATCTCCACAGCCACGTGTCACTCCCGGAACCACTTGATGACCAGCCCTACCGCTGCCGCCAACAACCACCCGGCCGTCGCATCCAACGGCAACGGCGGAGAAGGGCCGTCCTCTCCCAGCATGTCCGTCTTGACGGTGCAATCCGCCGCGGCGGTTAACGACGGCGCCGTTAAAGACGCAGCCTCCGTTTCGAAGCCGTGA 1389 0.5846 MIMQPSSREMQQGINSLFNSSQIPLEDQIQGSQMHHPQQPELHDDFLEQMLSNLPSCTWPDLNPKPFWDSNPSASDVKPTDLSDESAPSNADNAAFQYDDQANLASKFRNHQISGSSPAAKSTTAEAVALMIQRQLLMSRGVMGAGDSGLHQMPLSLGGGGGNFEPSRKDFVDGSSFKSHIPTGEGTVQALYNGFAGAMHGNGQASNHTQHFHQPQGQNYGASGAATNQGPANGSPAQPKQRVRARRGQATDPHSIAERLRRERIAERMKALQELVPNANKTDKASMLDEIIVYVKFLQLQVKVLSMSRLGGAAAVAPLVADISSEGGGDCIQATANGGAGAPRNSNGNQTASSSNDTLTMTEHQVARLMEEDMGSAMQYLQGKGLCLMPISLATAISTATCHSRNHLMTSPTAAANNHPAVASNGNGGEGPSSPSMSVLTVQSAAAVNDGAVKDAASVSKP 462
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere14g0091 462 MobiDBLite consensus disorder prediction 1 37 - -
Dere14g0091 462 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 247 309 IPR036638 GO:0046983
Dere14g0091 462 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 54 397 - -
Dere14g0091 462 Pfam Helix-loop-helix DNA-binding domain 254 299 IPR011598 GO:0046983
Dere14g0091 462 MobiDBLite consensus disorder prediction 201 254 - -
Dere14g0091 462 MobiDBLite consensus disorder prediction 411 439 - -
Dere14g0091 462 Gene3D - 244 306 IPR036638 GO:0046983
Dere14g0091 462 MobiDBLite consensus disorder prediction 68 92 - -
Dere14g0091 462 MobiDBLite consensus disorder prediction 337 356 - -
Dere14g0091 462 FunFam Transcription factor bHLH66 246 311 - -
Dere14g0091 462 SMART finulus 255 304 IPR011598 GO:0046983
Dere14g0091 462 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 249 298 IPR011598 GO:0046983
Dere14g0091 462 MobiDBLite consensus disorder prediction 1 43 - -
Dere14g0091 462 MobiDBLite consensus disorder prediction 339 356 - -
Dere14g0091 462 MobiDBLite consensus disorder prediction 201 236 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere14g0091 Dere-ChrDere14 1036978 1039785 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere14g0091 225 461 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G24260 61.417 1.84e-88 268
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Dere14g0091 HLH 2.6e-08 No_clan