Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere14g0089 ATGGCTTATGACAGTGCAGCTATGCAGCTTCGCAGTGGGGATTCTCACCGGAATTTTCCTTGGACAAGCATTACTGTTGAGGAGCAAAATTTCCAGAATCAATATAGCCAAGAAGATGTGCTCAAGATGATAAAAGATGGTTCATACCAACCGAAATTTGCAGAGTTTCTGCAGGCTCGCTTCCGAGTTAATGAAACAGGTATTGGTGGTCTCAACTTGTCTGTGATGCAGAAAAGAGGAGGGCTCTCATGTAAGCTACTTTTCCGAAAGCAACTGACCCCGAGCGATGTGGGAAAGCTGAACAGAATTGTCATCCCCAAGAAAGATGCCACCACATACTTCCCTGAAATTTCTGAAAGGGTGGAAGAAGATGCAAATGCTGGTGTAATTGGTGATGCACAGCTAGATTTCTTCGACAGGATGATGAGGTCTTGGAAGTTCCGGTACTGCTACTGGACAAGCAGCCAGAGTTTTGTGTTCACAAGGGGTTGGAGTAGGTTTGTGAAGGATAAGCAGTTGAAGGCTAATGATGCTATTGCCTTTTACTTGTGTGAGGTTAAAGAAGGAGGGAAAATGGTGGAGAAATTCTTGGTGATTGACCCCATCAGGGGTGAAGACAGTGCTAGTAGCAGCTCAGTGATTGAAAGTGCTGATCATACTGTGGGGTTGAAACCTGAACTGTGCTTGGATGCTGAGAAAAAGCTTGAAGAGGAAATGATGGAAACTGACCCACCAAGCAATGTTGTGAGGAAAGGGTTTAGACTCTTCGGTGTTCAAATCAATTGA 786 0.4466 MAYDSAAMQLRSGDSHRNFPWTSITVEEQNFQNQYSQEDVLKMIKDGSYQPKFAEFLQARFRVNETGIGGLNLSVMQKRGGLSCKLLFRKQLTPSDVGKLNRIVIPKKDATTYFPEISERVEEDANAGVIGDAQLDFFDRMMRSWKFRYCYWTSSQSFVFTRGWSRFVKDKQLKANDAIAFYLCEVKEGGKMVEKFLVIDPIRGEDSASSSSVIESADHTVGLKPELCLDAEKKLEEEMMETDPPSNVVRKGFRLFGVQIN 261
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere14g0089 261 Gene3D - 84 205 IPR015300 -
Dere14g0089 261 CDD B3_DNA 87 200 IPR003340 GO:0003677
Dere14g0089 261 PANTHER B3 DOMAIN-CONTAINING TRANSCRIPTION FACTOR ABI3 1 260 IPR044800 GO:0003700
Dere14g0089 261 Pfam B3 DNA binding domain 88 192 IPR003340 GO:0003677
Dere14g0089 261 SMART B3_2 88 192 IPR003340 GO:0003677
Dere14g0089 261 SUPERFAMILY DNA-binding pseudobarrel domain 86 187 IPR015300 -
Dere14g0089 261 ProSiteProfiles B3 DNA-binding domain profile. 88 200 IPR003340 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere14g0089 Dere-ChrDere14 1011496 1012281 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere14g0089 2 260 RAV Transcription Factor Family AT1G50680 47.653 1.09e-72 224
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3 Dere14g0089 B3 3.7e-23 CL0405