Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere14g0088 ATGGCTGAAAAGGGCAAAGATGGTCACTCCAATTTGCTCCATGGGAAGTACGAGCTGGGTCGGCTTCTGGGTCACGGAACATTCGCGAAGGTGTACCACGCGCGGAACTTTCAGACGGGGAAGAGCGTGGCGATGAAGGTCGTGGGGAAAGAGAAGGTGATAAAAGTGGGAATGATGGAGCAGATCAAGAGGGAAATCTCAGTGATGAACATGGTGAAGCACCCGAACATCGTCGAGCTCCACGAAGTCATGGCCAGCAAATCCAAGATTTACATCGCCATGGAGCTCGTTCGAGGCGGCGAGCTCTTCAATAAAGTCGCTCGTGGTCGATTGAGAGAAGACGTGGCTAGAGTCTATTTCCAGCAATTGATCTCCGCCATCGATTTCTGCCACAGCCGCGGCGTTTACCACCGCGACCTCAAGCCGGAGAATCTGCTCCTCGACGAGAATGGAAACCTCAAGGTCACCGACTTCGGCCTCAGCACCTTCTCCGAGCACTTACGGCAAGATGGTTTATTGCATACTACTTGTGGTACTCCGGCGTATGTCTCGCCTGAGGTAATCGGAAAAAAAGGCTACGACGGCGCTAAGGCGGATATCTGGTCTTGCGGCGTCATCTTATACGTCCTTCTCGCCGGATTCTTACCCTTTCAGGACGACAATTTGGTTTCCATGTACAAAAAAATTTACAGAGGCGACTTCAGATGCCCGCCGTGGTTTTCGTCCGAAGCCCGACGACTCATCACGAAGCTCCTCGATCCGAACCCGAATACCCGAATCACGATTTTAAAAGTCATGGACTCGTCGTGGTTCAAGAAATCGATCCCAAAGAGCGTGAAGACGAAAACCGAGCAGGAATTCGAATTCGAATGCGATGAGAATTTCGAGAAGTCGAAGCAGACTCAACCTGCGACGATGAACGCGTTCCATTTGATATCCCTATCGGCGGGGTTCGATTTGTCGCCACTGTTCTCGGAGAAGAATAGGGACATGAGGTTTGCGACGGCCAGGCCGGCGAGTAGCGTGATATCGAGGCTAGAGGAGGTGGCGAGAGCGGAGAGATTCAACATAAGGAAGAGCGACACGAAGGTGAGGCTGCAGAGACAGGAGTGTGGGCGAAAGGGGAGGCTGGCGATAGCGGCGGAGATATACTCCGTAACGCCGTCGCTGGTGGTGGTGGAGGTGAAGAAAGATAACGGTGACACCTTGGAGTACAACCAGTTCTGCAGCAAGGAGCTCCGACCCGCCCTCAAGGACATCGTGTGGACATCACCCTCTGAAAACCCGACACCCGCTTGA 1299 0.5319 MAEKGKDGHSNLLHGKYELGRLLGHGTFAKVYHARNFQTGKSVAMKVVGKEKVIKVGMMEQIKREISVMNMVKHPNIVELHEVMASKSKIYIAMELVRGGELFNKVARGRLREDVARVYFQQLISAIDFCHSRGVYHRDLKPENLLLDENGNLKVTDFGLSTFSEHLRQDGLLHTTCGTPAYVSPEVIGKKGYDGAKADIWSCGVILYVLLAGFLPFQDDNLVSMYKKIYRGDFRCPPWFSSEARRLITKLLDPNPNTRITILKVMDSSWFKKSIPKSVKTKTEQEFEFECDENFEKSKQTQPATMNAFHLISLSAGFDLSPLFSEKNRDMRFATARPASSVISRLEEVARAERFNIRKSDTKVRLQRQECGRKGRLAIAAEIYSVTPSLVVVEVKKDNGDTLEYNQFCSKELRPALKDIVWTSPSENPTPA 432
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere14g0088 432 ProSiteProfiles Protein kinase domain profile. 17 271 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere14g0088 432 Pfam Protein kinase domain 17 271 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere14g0088 432 ProSitePatterns Serine/Threonine protein kinases active-site signature. 135 147 IPR008271 GO:0004672|GO:0006468
Dere14g0088 432 Gene3D Kinase associated domain 1, KA1 300 423 - -
Dere14g0088 432 FunFam Non-specific serine/threonine protein kinase 9 96 - -
Dere14g0088 432 Pfam NAF domain 303 359 IPR004041 GO:0007165
Dere14g0088 432 ProSiteProfiles NAF domain profile. 301 325 IPR018451 GO:0007165
Dere14g0088 432 CDD STKc_SnRK3 16 270 - -
Dere14g0088 432 FunFam Non-specific serine/threonine protein kinase 301 422 - -
Dere14g0088 432 PANTHER CALCIUM/CALMODULIN-DEPENDENT PROTEIN KINASE KINASE-RELATED 11 419 - -
Dere14g0088 432 CDD CIPK_C 307 418 - -
Dere14g0088 432 Gene3D Phosphorylase Kinase; domain 1 14 98 - -
Dere14g0088 432 ProSitePatterns Protein kinases ATP-binding region signature. 23 50 IPR017441 GO:0005524
Dere14g0088 432 SUPERFAMILY Protein kinase-like (PK-like) 14 291 IPR011009 -
Dere14g0088 432 FunFam Non-specific serine/threonine protein kinase 7 298 - -
Dere14g0088 432 Gene3D Transferase(Phosphotransferase) domain 1 99 277 - -
Dere14g0088 432 SMART serkin_6 17 271 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere14g0088 Dere-ChrDere14 1005688 1006986 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere14g0088 3 432 CBL-interacting serine-threonine protein kinases AT4G30960 74.550 0.0 648
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CAMKL-CHK1 Dere14g0088 Pkinase 5.7e-73 CL0016