Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere14g0081 ATGGGTTGGGGAGCATTTGGTTCTATTATAGTTCTGACGTTTTTCTTTGAGCGTTTGGCGTGCCAGCAACCAAATACTGACGATTTCTTTGTGTCTGAGTTCTTGAAGAAGATGGGTATAGCATCTTCCTCCCAAGCCTTCAACTTCTCCAGTTCTGTTTGTTCATGGCAAGGGGTTTTCTGTGATGCTAATAAAGAACATGTCGTTGAGTTGATGGCTTCTGGTATGGGGCTCTCTGGGCCTATTCCTGATACCACCATTGGCAAGCTCAGCAAGCTTCAATCTTTGGATCTTAGCAACAACAAAATCACTGCCTTGCCTTCTGATTTCTGGAGTCTAAGCTCTCTGAAGATTCTTAACCTCTCCTCCAATCAGATATCAGGTTCACTGACCAGCAACTTTGGCAACTTTGGCCTTCTTGAAACCTTTGACTTGTCCACCAACAATTTTTCTGGGGAAATTCCTGAAGATATTAGCTCACTTGTGAGTTTAAGGATCCTCAAACTTGACAAGAACAGGTTTGAGCAGACCATACCTTCTGGGATTCTCAAGTGTCAGTCTCTAGTTTCAATTGATCTTTCATCAAATCAGCTTAGTGGGACTCTTCCTGGTGGTTTTAGAGCTGCTTTTCCTAAACTCAAAAGCTTGAACCTTGCAGGGAATAATATTCTTGGTCGTGTTTCAGATATTTCAGGGTTAAAATCCATTACTACTGTTAACATATCAGGAAATTCCTTTCAGGGTTCTGTTCTGGGTGTATTTCAGGAACAGTTGGAGGTCATTGACCTTAGCCGGAACCAGTTTCGGGGTCACATTTCTCAGGTAAAGTTCAACTCTAAGTACAATTGGTCTCATTTGATTTATCTGGATTTGTCTGAGAATAGGCTTAGTGGGGAAATTTTCCAAAATTTGAACGAAGCCCTGAATCTCAAACACCTTAATCTTGCACACAACAGATTTGCAAGACAGAAATTTCCACAAATTGAAAAGCTCTCAAGATTAGAATATCTGAACTTGTCCAAAACTAGTCTGGCTGGTCACATTCCTGCTGAAATATCTCAGCTGAGTAATTTGAATGCCCTTGATATTTCTATGAATCATCTTATAGGGAGAATTCCATTTCTTAGGAGTAAAAACCTCCTAATTCTTGACCTTTCAAACAACAATTTGAGTGGAGAAATCCCTCCATCTGTCTTGGAGAAACTCCCATGGATGGAGAAATATAACTTTTCTTACAATAATTTAACCTTCTGTTCTTTGGGAATTAACCCCAATATCCTGCAAACGGCATTCTTTGGATCATCGAACAGTTGCCCAATTGCTGCAAATCCCATTCTTTTCAGAAGAACTACTGAACACAAGGGAATGAAGCTAGCTCTGGTATTGACCCTCTCAATGATCTGCCTACTTTCTGGGCTTTTATTTCTAGCATTTGGTTGCAGAAGGACAACAAAATTGTGGGCAGTTAAACAAACTTCATACAAAGAAGAGCAGAACATTTCAGGTCCATTCTCGTTCCAGACTGATTCAACTACCTGGGTGGCTGATGTTAAGCAAGCGAACTCAGTGCCAGTAGTAATCTTTGATAAGCCATTACTGAACATTACATTTTCTGATCTCTTGTCCTCAACTTCAAATTTCGATCGGGATACCCTTTTGGCTGAAGGGAAATTTGGGCCTGTTTACCGAGGCTTTCTACCTGGTGGCGTTCATGTAGCAGTTAAAGTTTTGGTTGTTGGGTCTTCATTGACAGATCAAGAGGCTGCAAAAGAGCTTGAGTATCTTGGTCGAATCAAGCACCCCAATCTTGTTCCCTTAACTGGATATTGCTTTGCTGGTGATCAAAGGATTGCCATATATGATTATATGGAGAATGGAAACTTGCAAAACTTGCTTCATGACTTGCCAATTGGGGTACAGAGGACAGATGATTGGGGCACAGACACATGGGAAGGACATGATGAGAATGGTATCCACAATGCTGGTTCTGAGGGATTATTGCTCACATCTTGGCGATTTCGCCACAATATTGCCCTTGGCACTGCCCGAGCACTGGCCTTTCTGCACCATGGGTGCTCACCTCCAATCATTCATAGAGATGTCAAAGCTAGCAATGTCTATTTGGACTATAACTTGGAGCCAAGGTTGTCTGATTTTGGGCTGGCTAGGATTTTTGGAAGTGGCTTGGATGAAGAGATTGCTCATGGCTCTCCCGGCTATGTTCCACCGGAGTTTTCTCAACCAGAATATGACTCTCCAACACCTAAATCCGATGTCTACTGTTTTGGGGTTATTCTCTTTGAGTTAATGACTGGAAAAAAACCAGTTGGGGATGATTATCCGGAAGAGAAAGAAGGGACTTTGGTAAGTTGGGTCAGAGGACTGGTAAGAAAGAACCTAGCCTCAAGAGCTATTGATCCAAAAATTCGTGATACAAAATATGATGATCAAATCGAGGAAACCCTTAAGATTGGTTATCTGTGTACTGCTGATCTTCCCTCTAAGCGACCTTGCATGCAGCAGATGGTGGGACTTCTTAAAGATATTGAGCCTACTGCTAATTAG 2565 0.4179 MGWGAFGSIIVLTFFFERLACQQPNTDDFFVSEFLKKMGIASSSQAFNFSSSVCSWQGVFCDANKEHVVELMASGMGLSGPIPDTTIGKLSKLQSLDLSNNKITALPSDFWSLSSLKILNLSSNQISGSLTSNFGNFGLLETFDLSTNNFSGEIPEDISSLVSLRILKLDKNRFEQTIPSGILKCQSLVSIDLSSNQLSGTLPGGFRAAFPKLKSLNLAGNNILGRVSDISGLKSITTVNISGNSFQGSVLGVFQEQLEVIDLSRNQFRGHISQVKFNSKYNWSHLIYLDLSENRLSGEIFQNLNEALNLKHLNLAHNRFARQKFPQIEKLSRLEYLNLSKTSLAGHIPAEISQLSNLNALDISMNHLIGRIPFLRSKNLLILDLSNNNLSGEIPPSVLEKLPWMEKYNFSYNNLTFCSLGINPNILQTAFFGSSNSCPIAANPILFRRTTEHKGMKLALVLTLSMICLLSGLLFLAFGCRRTTKLWAVKQTSYKEEQNISGPFSFQTDSTTWVADVKQANSVPVVIFDKPLLNITFSDLLSSTSNFDRDTLLAEGKFGPVYRGFLPGGVHVAVKVLVVGSSLTDQEAAKELEYLGRIKHPNLVPLTGYCFAGDQRIAIYDYMENGNLQNLLHDLPIGVQRTDDWGTDTWEGHDENGIHNAGSEGLLLTSWRFRHNIALGTARALAFLHHGCSPPIIHRDVKASNVYLDYNLEPRLSDFGLARIFGSGLDEEIAHGSPGYVPPEFSQPEYDSPTPKSDVYCFGVILFELMTGKKPVGDDYPEEKEGTLVSWVRGLVRKNLASRAIDPKIRDTKYDDQIEETLKIGYLCTADLPSKRPCMQQMVGLLKDIEPTAN 854
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere14g0081 854 ProSiteProfiles Leucine-rich repeat profile. 212 234 IPR001611 GO:0005515
Dere14g0081 854 Gene3D Ribonuclease Inhibitor 179 276 IPR032675 -
Dere14g0081 854 Gene3D Ribonuclease Inhibitor 32 178 IPR032675 -
Dere14g0081 854 ProSiteProfiles Leucine-rich repeat profile. 92 113 IPR001611 GO:0005515
Dere14g0081 854 Gene3D Transferase(Phosphotransferase) domain 1 623 854 - -
Dere14g0081 854 Pfam Leucine Rich Repeat 379 398 IPR001611 GO:0005515
Dere14g0081 854 FunFam Calmodulin-binding receptor kinase CaMRLK 256 374 - -
Dere14g0081 854 PRINTS Leucine-rich repeat signature 93 106 - -
Dere14g0081 854 PRINTS Leucine-rich repeat signature 113 126 - -
Dere14g0081 854 SMART serkin_6 547 853 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere14g0081 854 SUPERFAMILY Protein kinase-like (PK-like) 523 845 IPR011009 -
Dere14g0081 854 ProSiteProfiles Leucine-rich repeat profile. 379 401 IPR001611 GO:0005515
Dere14g0081 854 ProSitePatterns Serine/Threonine protein kinases active-site signature. 696 708 IPR008271 GO:0004672|GO:0006468
Dere14g0081 854 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 107 202 - -
Dere14g0081 854 FunFam Putative LRR receptor-like serine/threonine-protein kinase 508 622 - -
Dere14g0081 854 PANTHER LEUCINE RICH REPEAT KINASE 2 106 850 - -
Dere14g0081 854 SUPERFAMILY L domain-like 48 424 - -
Dere14g0081 854 SMART LRR_typ_2 90 112 IPR003591 -
Dere14g0081 854 SMART LRR_typ_2 378 401 IPR003591 -
Dere14g0081 854 SMART LRR_typ_2 186 208 IPR003591 -
Dere14g0081 854 SMART LRR_typ_2 113 136 IPR003591 -
Dere14g0081 854 SMART LRR_typ_2 161 185 IPR003591 -
Dere14g0081 854 SMART LRR_typ_2 331 355 IPR003591 -
Dere14g0081 854 Gene3D Phosphorylase Kinase; domain 1 507 622 - -
Dere14g0081 854 Gene3D Ribonuclease Inhibitor 375 446 IPR032675 -
Dere14g0081 854 Gene3D Ribonuclease Inhibitor 277 374 IPR032675 -
Dere14g0081 854 ProSiteProfiles Protein kinase domain profile. 547 853 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere14g0081 854 Pfam Leucine rich repeat 82 126 IPR001611 GO:0005515
Dere14g0081 854 Pfam Protein tyrosine and serine/threonine kinase 551 844 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere14g0081 Dere-ChrDere14 930082 932646 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere14g0081 63 850 Receptor kinase-like Gene Family AT4G39400 34.077 1.27e-109 362
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VII-2 Dere14g0081 PK_Tyr_Ser-Thr 2.5e-32 CL0016