Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere14g0074 ATGAAGTTTAGGTTTTGGCGAGAGCATTCTGGATATCTGAGGGTTGAGTCAGGTTGTGTATGTGTGATATATGTGATCAACTTTGCGAAGATGTTTGACTGTGGTTACAAGTCACAATACATGGGTCGCCAGCGGGAAAAATTTGTGAGGTTGGATGACTTGGACTCTAGACTATCTTCATCTTCTGATGTTGGAGTTAATAAATGTGGATTTAGTACTGTTAAATTAAGCCATGGTGGTCATGCAAGCGGTGGAACAACTGGATCTTTTAAAAGAGGAATGAGAAAGGGATCTGAAGGACTGAAGTCAATTGGCCGATCACTTAGATTTGGGGTATCTCGGGCAGTCTTCCCAGAAGACCTTAAAGTGTCAGAGAAGAAGATATTTGATCCTCAAGACAAATTTTTGCTCTTATGGAATAAGCTTTTTGTAATCTCATGCATTTTGGCAGTCTCTGTTGATCCATTGTTTTTTTATCTCCCTGTCATCAATGATTCATCAAAGTGTATTGGTATAGATCGAAAGTTGGCAATCATAGTCACCACCTTGAGGACGGCTGTTGATGCTTTCTATCTTATACACATGGCTCTCCAATTTCGTACTGCTTACATAGCTCCGTCATCACGTGTCTTTGGACGGGGTGAACTTGTAATAGATCCATCACAAATAGCCAAGCGATACATGCGGCGCTATCTCATCGTCGATTTTCTATCTGTGTTACCCTTGCCACAGATTGTAGTTTGGAGGTTTCTTCAGAGGTCAAAAGGTTCAGATGTACTGGCAACAAAACAGGCATTACTGTTCATTATCTTGCTCCAGTATGTACCTAGATTTCTCCGGATGGTACCGTTGACTTCAGAGCTTAAGAGAACAGCTGGTGTCTTTGCCGAAACTGCATGGGCAGGTGCTGCATATTATCTGCTATTATACATGCTTGCTAGCCATATAGTTGGGGCTTTTTGGTACTTGTTAGCTGTTGAACGCAATGACTCTTGTTGGCAGAAAGCTTGTAGTGAAAATGGGTGCAATAAAAATTTCTTGTATTGTGGCAACCAGCATATGGAAGGTTACAGTGCCTGGCAGAATAGAAGTGAAGGTATTCTCAAGTTAAAGTGCTCTGCAGATGACAAAAATCCACCTTTTGATTATGGAATTTTCACGCAAGCATTTTCATCTGGTATTGTTTCGTCTAAAAAGTTCCTCTCTAAATACTGTTACTGTTTATGGTGGGGGCTCCAGAATTTGAGTACACTTGGCCAGGGGCTTCAAACCAGCACCTATGTTGGGGAGGTTATATTTTCAATAGCGCTAGCCATTTTTGGACTTATCCTCTTCGCACTCCTGATTGGTAACATGCAGACATACCTTCAGTCTCTTACCATTAGGCTTGAGGAAATGAGAGTCAAAAGGCGTGATTCAGAACAGTGGATGCATCATCGCTTGCTCCCCCATGAGCTTAGAGAGCGCGTTAGACGCTATGATCAATATAAGTGGTTGGCAACACGTGGTGTAGATGAAGAAAGTTTGGCTCAGAGTCTACCAAAGGATCTTAGAAGAGATATTAAACGTCATCTTTGTCTGGCTTTAGTGAGAAGGGTTCCATTATTCGAGAGTATGGATGAGAGATTGCTTGATGCAATTTGTGAGAGACTGAAACCATGTTTATTTACAGAGAATACTTACATTGTTCGGGAAGGAGATCCAGTGGATGAGATGCTTTTCATCATACGCGGTCGCCTAGAGAGTGTTACCACTGATGGGGGAAGAAGTGGATTTTTTAATCGCAGTTTCCTAAAAGAAGCAGACTTCTGTGGGGAGGAACTTTTAACCTGGGCATTGGATCCCAAATCTGGCTCCAACCTACCATCTTCTACTAGAACAGTTAAGGCGCTAACAGAGGTTGAGGCTTTTGCCTTGATCGCTGAAGAGTTAAAATTTGTTGCAAGTCAATTTAGGCGCCTCCACAGTAGACAGGTTCAACACACCTTCCGCTTTTACTCACAACAATGGAGAACCTGGGCTGCATGCTTTATTCAAGCAGCCTGGCGTCGATATTCTAAGAGGAAGATTATGGAGCTTCATCGAAAAGAAGAATCCGACAAGTCAGAAGGAACTCGTAACAATGTCAGCAGTGGCTCATATAGCCTTGGTGCCACCTTCTTAGCCTCAAGATTTGCAGCCAATGCTCTTCGTGGTGTACATCGCAATAGGAATGCCAAGACTGCTAGGGAGTTGGTGAAACTACAAAAGCCGCCAGAACCTGACTTTACAGCAGATGATGCAGACTAA 2289 0.4273 MKFRFWREHSGYLRVESGCVCVIYVINFAKMFDCGYKSQYMGRQREKFVRLDDLDSRLSSSSDVGVNKCGFSTVKLSHGGHASGGTTGSFKRGMRKGSEGLKSIGRSLRFGVSRAVFPEDLKVSEKKIFDPQDKFLLLWNKLFVISCILAVSVDPLFFYLPVINDSSKCIGIDRKLAIIVTTLRTAVDAFYLIHMALQFRTAYIAPSSRVFGRGELVIDPSQIAKRYMRRYLIVDFLSVLPLPQIVVWRFLQRSKGSDVLATKQALLFIILLQYVPRFLRMVPLTSELKRTAGVFAETAWAGAAYYLLLYMLASHIVGAFWYLLAVERNDSCWQKACSENGCNKNFLYCGNQHMEGYSAWQNRSEGILKLKCSADDKNPPFDYGIFTQAFSSGIVSSKKFLSKYCYCLWWGLQNLSTLGQGLQTSTYVGEVIFSIALAIFGLILFALLIGNMQTYLQSLTIRLEEMRVKRRDSEQWMHHRLLPHELRERVRRYDQYKWLATRGVDEESLAQSLPKDLRRDIKRHLCLALVRRVPLFESMDERLLDAICERLKPCLFTENTYIVREGDPVDEMLFIIRGRLESVTTDGGRSGFFNRSFLKEADFCGEELLTWALDPKSGSNLPSSTRTVKALTEVEAFALIAEELKFVASQFRRLHSRQVQHTFRFYSQQWRTWAACFIQAAWRRYSKRKIMELHRKEESDKSEGTRNNVSSGSYSLGATFLASRFAANALRGVHRNRNAKTARELVKLQKPPEPDFTADDAD 762
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere14g0074 762 FunFam Cyclic nucleotide-gated ion channel 1 462 526 - -
Dere14g0074 762 Pfam Ion transport protein 138 461 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
Dere14g0074 762 Gene3D Helix hairpin bin 463 526 - -
Dere14g0074 762 CDD CAP_ED 535 666 IPR000595 -
Dere14g0074 762 ProSiteProfiles cAMP/cGMP binding motif profile. 535 619 IPR000595 -
Dere14g0074 762 Pfam Cyclic nucleotide-binding domain 556 645 IPR000595 -
Dere14g0074 762 FunFam Cyclic nucleotide-gated ion channel 1 533 651 - -
Dere14g0074 762 Gene3D Jelly Rolls 533 653 IPR014710 -
Dere14g0074 762 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 15-RELATED-RELATED 119 756 - -
Dere14g0074 762 Gene3D - 141 460 - -
Dere14g0074 762 ProSiteProfiles IQ motif profile. 671 700 IPR000048 GO:0005515
Dere14g0074 762 MobiDBLite consensus disorder prediction 740 762 - -
Dere14g0074 762 SUPERFAMILY Voltage-gated potassium channels 130 457 - -
Dere14g0074 762 SMART cnmp_10 535 666 IPR000595 -
Dere14g0074 762 SUPERFAMILY cAMP-binding domain-like 464 654 IPR018490 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere14g0074 Dere-ChrDere14 857556 866779 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere14g0074 31 760 Ion Channels AT2G23980 76.368 0.0 1170