Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere14g0054 ATGTGCGAGACATGTGGGGATAAGGTGGGAGTGACGGAGGAGGGAGAGTTGTTCGTGGCGTGCAATGAGTGTGGTTTTCCGGTGTGCCGGCCCTGCTATGAGTACGAGAGAAGAGAAGGTCCCAGCTTTGCCCGCACTGCAAGACCAGATACAAGCGTCTCAAAGGGAGCCCCAGGTTACAATGTGTATCACGCCATGATGAAAACAGGAAGTGAAAGATGGGACGAAAAGAAAGAAACTGGTTGGAAAGAGAGAATGGATGACTGGAAATTGCAGCAAGGCAATTTAGGACCAGACCCTGATGATGACCCGGAAGCTGCCATAATAGATGAAGCGAGGCAGCCACTGTCAAGGAAAGTAGCGATAGCATTAGCATCGAGTAAAATCAATCCATATAGGACAGTGATTGTGGCGTGA 417 0.4964 MCETCGDKVGVTEEGELFVACNECGFPVCRPCYEYERREGPSFARTARPDTSVSKGAPGYNVYHAMMKTGSERWDEKKETGWKERMDDWKLQQGNLGPDPDDDPEAAIIDEARQPLSRKVAIALASSKINPYRTVIVA 138
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere14g0054 138 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 1 81 IPR013083 -
Dere14g0054 138 Pfam Zinc-binding RING-finger 1 58 IPR027934 -
Dere14g0054 138 SUPERFAMILY RING/U-box 1 45 - -
Dere14g0054 138 MobiDBLite consensus disorder prediction 87 106 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere14g0054 Dere-ChrDere14 628868 630475 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere14g0054 1 40 Cell Wall Biosynthesis AT5G17420 80.000 2.99e-19 80.9