Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere14g0053 ATGAGCAAGTCACGTGTGATTAGGTACGAGGGGGAAGGTGAACCAAACATGCTGGCTCCTGTAGATTTCTTTGTCAGTGATGTGGATCCCATGAAAGAACCTCCTCTGAGAGAATATGAAGAATTAAAGGTTAGGATCAATGCACTTGTGGCTAAAGCCCAAAAGGTTCCTTCAGGAGGGTGGATTATGCAGAATGGAACACCATGGCCAGGAAATAATACCAAGGATTATCCTGGTATGATTCAAGTGTTCCTTGGTCACATTGGAGGCTTTGATGCCGAAGGAAACCAACTTCCTCGTCTAGTCTATGTCTCACTAGATAAAAGGCTTGGTTTTCAGCATCACAAAAAAGCTGGTGCCATGAATGCTCTGATTCGTGTCTCTGCTGTGCTCACAAATGCTCCTTTCATTCTGAACTTGGACTGTGATCATTATGTCAATAACAGCAAGGCAGTCCGAGAGGTCATGTGCTTCTTGATGGATCCCCGAACAGGAAAGAAGGTCTGCTATGTGCAATTTCCTCAAAGATTTGATGGCATTGACAGGCATGATCGTTATGCCAATAGGAACACAGTTTTCTTTGATATTAACATGAAGGGTCTAGATGGCATTCAGGGTCCTGTATACGTGGGCACAGGCTGTGACTGCTGCCCTTGTTTTGGACGTGGAAAGAAGCTTAAGTATGCAAAGGATGATGCAAATGGAGAGGCTGCAAGGTTACAAGGAATGGATGATGACAAAGAGTTGTTAATGTCCCAAATGAATTTTGAGAAGAAATTTGGACAGTCATCTATATTTGTGACTTCAACTCTAATGGAAGAAGGTGGTGTGCGTCCTTCCTCAAGTCCTGTAGCTCCACTGAAAGAAGCCATTCATGTCATCAGTTGTGGCTATGAAGACAAAATTGATTGGGGAACTGAGCTAGGTTGGATCTATGGGTCTATTACAGAGGATATTCTAACAGGTTTCAAGATGCATTGCCGTGGTTGGAGGTCTATATACTGTATGCCAAAGAGACCAGCCTTCAAGGGTACTGCTCCTATCAACTTGTCAGATAGGCTGAACCAGGTGCTTCGTTGGGCACTTGGCTCCATTGAGATCTTCTTCAGTCACCATTGCCATGCATGGTATGGCTACAAGGGAGGGATTAAGCTCAAGTGGCTCGAACGATTTGCTTATATAAGCACCTTTGCTGGTTTATACTTCATTGCTCTTTTCTCTTCAATAATTGCAACGGGCATTCTGGAGCTGAAATGGAGTGGAGTTAGCATAGAGGAATGGTGGAGAAATGAACAATTCTGGGTCATTGGCGGTGTATCAGCACATCTCTTTGCTGTTATACAAGGGGTTGTTGCTGGAATCTCAGATGCCATTAACAATGGCTACCAGTCTTGGGGACCACTATTTGGAAAGCTCTTCTTCTCCATCTGGGTCATTGTTCATCTATATCCATTCCTTAGAGGACTGATGGGTCGGCAAAACGGAACACCCACCATTGTTGTGATATGGTCAGTGCTATTGGCTTCTATTTTCTCACTGATCTGGGTAAGAATTGACCCATTTGTCATGAAAACCAAGGGACCTGATACCAAGCTATGTGGAATCAACTGCTGA 1614 0.4405 MSKSRVIRYEGEGEPNMLAPVDFFVSDVDPMKEPPLREYEELKVRINALVAKAQKVPSGGWIMQNGTPWPGNNTKDYPGMIQVFLGHIGGFDAEGNQLPRLVYVSLDKRLGFQHHKKAGAMNALIRVSAVLTNAPFILNLDCDHYVNNSKAVREVMCFLMDPRTGKKVCYVQFPQRFDGIDRHDRYANRNTVFFDINMKGLDGIQGPVYVGTGCDCCPCFGRGKKLKYAKDDANGEAARLQGMDDDKELLMSQMNFEKKFGQSSIFVTSTLMEEGGVRPSSSPVAPLKEAIHVISCGYEDKIDWGTELGWIYGSITEDILTGFKMHCRGWRSIYCMPKRPAFKGTAPINLSDRLNQVLRWALGSIEIFFSHHCHAWYGYKGGIKLKWLERFAYISTFAGLYFIALFSSIIATGILELKWSGVSIEEWWRNEQFWVIGGVSAHLFAVIQGVVAGISDAINNGYQSWGPLFGKLFFSIWVIVHLYPFLRGLMGRQNGTPTIVVIWSVLLASIFSLIWVRIDPFVMKTKGPDTKLCGINC 537
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere14g0053 537 PANTHER X-BOX TRANSCRIPTION FACTOR-RELATED 399 451 - -
Dere14g0053 537 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 93 215 IPR029044 -
Dere14g0053 537 FunFam Cellulose synthase 51 222 - -
Dere14g0053 537 Pfam Cellulose synthase 37 214 IPR005150 GO:0016020|GO:0016760|GO:0030244
Dere14g0053 537 Pfam Cellulose synthase 449 531 IPR005150 GO:0016020|GO:0016760|GO:0030244
Dere14g0053 537 Pfam Cellulose synthase 234 396 IPR005150 GO:0016020|GO:0016760|GO:0030244
Dere14g0053 537 SUPERFAMILY Nucleotide-diphospho-sugar transferases 95 430 IPR029044 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere14g0053 Dere-ChrDere14 606179 610583 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere14g0053 24 537 Cell Wall Biosynthesis AT5G17420 70.209 0.0 850