Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere14g0043 ATGGCAAAACACAATAGGTCATTTGCTTTTGCGGCTCAAATTTTAGCCATAGTAGTTATCACTCTTTGTCTTCTGGGGAATACTTGTTTCGCTTTTCAGGCATCTTCTTCCTCGGACCCTTCTGTCCAGCAACAACGGGACAGGGTTGGTAGGCTGCCAGGTCAAACATTTAACATCGGCTTTGCACACTATGCTGGGTATGTCACGGTCAACCAGAAAGCTGGGAGGGCACTGTTTTACTGGTTCTTTGAGGCTGCTAAAGGCCCTGAAACGAAGCCTCTTGTTCTATGGCTCAATGGAGGACCTGGATGTTCATCCATTGCTTATGGGGAGGCAGAGGAAATTGGCCCCTTTCATATTCAGCCAGATAGCAAGACCCTTTATCTAAATCCTTACTCTTGGAATCGAGTTGCCAACATTCTTTTTGTTGATTCTCCTGTTGGGGTTGGATTTTCGTATTCCAATACTTCATCAGACATACTGAACAATGGTGATCGGAGGACTGCTAAGGACTCTTTGAAATTCCTATTGAAGTGGTTTGAGCGTTTTCCCCAGTATAAAGGAAGAGACTTCTATATTGCTGGTGAGAGCTATGCAGGGCATTATGTTCCCCAACTTAGCCAAGTTATTGTGAAGTACAACAGGGAAGCCAAAGAAAAAACTATGAATCTAAAAGGCTACATGGTAGGAAATGCTCTAACTGATGATTACCATGATCACAAGGGGATTGCCCAATTTTTGTGGTCATCCGGTTTGATTTCTGATCAAACATACCAGCAAATGAACCTTCAATGTGATCTTGAGTCTTTCATAAATCCATCAAGTTCATGCGAAAATATTTTAGAGATTGCTGATAAAGAAATTGGCAACATCGATCAGTATAGTATCTTCACTCCTCCATGCCCTGCTAATGTAAGCCAGACAAACCAGCTAGTGAAAAGAAAGCATAGAATTGGCAGACTCAGTGGGTCATACGATCCTTGCACTGAGAAGCACTCCACTGTATACTTCAATCTACCTGAGGTCCAAAAGGCTCTTCATGTTGATCCAGCACATAAGCCTGCTAAATGGGAGACCTGCAGTGAAGTGGTAAATAGCAACTGGAAGGATTCTCCATTGACAGTGCTCAATATTTATCGCGAGCTTTTTCCGTTAGGACTGAGGATATGGATGTTCAGTGGAGATACAGATGCTGTAATCCCAGTGACATCCACTCGCTACAGTATAGATGCTCTGAAGCTTCCAACTGTGAGCCCTTGGCGTCCTTGGTATGATGATGGGCAAGTGGGAGGATGGACCCAGGAATATGAAGGCCTCACTTTTATAGCAGTAAGGGGAGCAGGGCATGAGGTTCCTCTGCATAGACCAAAACTTGCTCTTGCACTCATCAAAGCCTTCCTGGCTGGAACTTCCATGCCCTCCCTTGACCCTGAGCTTGTCAGTGCCTCTTGA 1452 0.4449 MAKHNRSFAFAAQILAIVVITLCLLGNTCFAFQASSSSDPSVQQQRDRVGRLPGQTFNIGFAHYAGYVTVNQKAGRALFYWFFEAAKGPETKPLVLWLNGGPGCSSIAYGEAEEIGPFHIQPDSKTLYLNPYSWNRVANILFVDSPVGVGFSYSNTSSDILNNGDRRTAKDSLKFLLKWFERFPQYKGRDFYIAGESYAGHYVPQLSQVIVKYNREAKEKTMNLKGYMVGNALTDDYHDHKGIAQFLWSSGLISDQTYQQMNLQCDLESFINPSSSCENILEIADKEIGNIDQYSIFTPPCPANVSQTNQLVKRKHRIGRLSGSYDPCTEKHSTVYFNLPEVQKALHVDPAHKPAKWETCSEVVNSNWKDSPLTVLNIYRELFPLGLRIWMFSGDTDAVIPVTSTRYSIDALKLPTVSPWRPWYDDGQVGGWTQEYEGLTFIAVRGAGHEVPLHRPKLALALIKAFLAGTSMPSLDPELVSAS 483
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere14g0043 483 ProSitePatterns Serine carboxypeptidases, histidine active site. 439 456 IPR033124 GO:0004185
Dere14g0043 483 Gene3D alpha/beta hydrolase 43 303 IPR029058 -
Dere14g0043 483 PRINTS Carboxypeptidase C serine protease (S10) family signature 179 204 IPR001563 GO:0004185|GO:0006508
Dere14g0043 483 PRINTS Carboxypeptidase C serine protease (S10) family signature 130 142 IPR001563 GO:0004185|GO:0006508
Dere14g0043 483 PRINTS Carboxypeptidase C serine protease (S10) family signature 143 153 IPR001563 GO:0004185|GO:0006508
Dere14g0043 483 PRINTS Carboxypeptidase C serine protease (S10) family signature 439 452 IPR001563 GO:0004185|GO:0006508
Dere14g0043 483 FunFam Carboxypeptidase 43 303 - -
Dere14g0043 483 FunFam Carboxypeptidase 375 469 - -
Dere14g0043 483 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 50 456 IPR001563 GO:0004185|GO:0006508
Dere14g0043 483 Gene3D - 328 366 - -
Dere14g0043 483 Gene3D - 375 469 - -
Dere14g0043 483 SUPERFAMILY alpha/beta-Hydrolases 49 472 IPR029058 -
Dere14g0043 483 ProSitePatterns Serine carboxypeptidases, serine active site. 193 200 IPR018202 GO:0004185
Dere14g0043 483 Pfam Serine carboxypeptidase 53 468 IPR001563 GO:0004185|GO:0006508
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere14g0043 Dere-ChrDere14 503920 509052 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere14g0043 338 472 Calmodulin-binding Proteins AT2G22960 25.000 1.85e-10 58.5