Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere14g0033 ATGCCAGATTTGGGAAATTTATCGCTCTCAGCAGCTCTGGAGCTGCCTCACTGCCCTAACCTTAATGCCCCTGCTGAACCATCTGATCTTACCGGTTCTTTGTACCCTGTCCCAGTCAAAACCCTAGGTAATGGTTACATTACCGACCACACTCTGCTATTCCCGGTTCTTCAGCGGGATGAATCCCACAATGGAAATGAATTTAGGGTTTCGAAGCGGAGCCGTGGTTCTTTGGATCGAGTCAGGAAGGCAGCCAATGATAAGAGTTTAGACGATCCCGTGAAAGATTGGTCTGAGAAGAAGATGGATTCTGGGTTCTGTAGACTCGGTTGCACTCTTCCATTCCTTGTTGGTGCTCCAAAGATGGCTGAATGCCTTTTTTGTCATCACTTTGTCTACCCTGGGAGGGAGGTTATATGCTCTGTTCGTGGCTGTGAAAGAGTCTACCATGTGGAATGTGCAAAAGAAGCTGTTGGGATCTCGAATCTCAAAAAGTTTAAGTGCCCACAACATGTATGCTTTATTTGCAAACAAAAATTACACTGGCGATGTGAGCAGTGCACCGTGGCATTTCATATCAAATGTGCTCCATGGCCTGATGCTGTGGTGCCTTTAAAGGATCATCCTGGACGAGCTATTTGTTGGAGGCATCCTACTGAGTGGCGTTTGGATAGGAAGCATGAAGCTTCAACAAGTGACATAGAGGAAGTGTTTTGCCGTCTGCCTCTTCCCTATGTCAATGAGGAGTTCAAGATTGATTTCACGTGGAAAGACATGGAGAGTAAGATTGAACCACCTCCATATGTACACATAAGACGCAACGTATACCTAGTGAAGAAGAAGCGCAGTGATGCAGATGATGGTGCAGGGTGCACCAGTTGTAGTTCTAATTCTACATGCTCTGATGATTGTGTGTGCAGAGTTCAATGCATAAGCTGCTCTAAGGCTTGTCGGTGCTCAGAATATTGCAATAATCGGCCATTTCGCAAGGACAAAAAGATCAAGATTGTTAAGACTGAGCTTTGTGGTTGGGGAGTAGAGGCAGCTGAAACCATCAATAAAGGCGAATTTATAATTGAGTATATTGGAGAAGTAATAGATGATGCTCTGTGTGAAAAAAGGCTATGGGACATGAAATATAAAGGCGAACAGAATTTTTATATGTGTGAGATTCGGAAAGACTTCACGATAGATGCAACTTTCAAAGGGAATACATCACGCTTTTTAAACCATAGCTGTGATCCCAATTGTGTTTTGGAAAAGTGGCAAGTTGATGGTGAAACACGTGTGGGTGTCTTCGCTGCCCGTCCTATAGAAGTTGGAGAACCGTTAACATACGATTACAGATTTGTGCAATTTGGACCAGAGGTAAAATGCTACTGTGGTGCTACCAATTGTCAAGGCTTTCTGGGGACCAAAAAGAAGATTGACAAGGTGAACCTTTGCTGGGGCTCAAAACGGAAGAGAACTTCAGCAGCTTGCATTGCAATAGTAACAGCCGTATGA 1506 0.4429 MPDLGNLSLSAALELPHCPNLNAPAEPSDLTGSLYPVPVKTLGNGYITDHTLLFPVLQRDESHNGNEFRVSKRSRGSLDRVRKAANDKSLDDPVKDWSEKKMDSGFCRLGCTLPFLVGAPKMAECLFCHHFVYPGREVICSVRGCERVYHVECAKEAVGISNLKKFKCPQHVCFICKQKLHWRCEQCTVAFHIKCAPWPDAVVPLKDHPGRAICWRHPTEWRLDRKHEASTSDIEEVFCRLPLPYVNEEFKIDFTWKDMESKIEPPPYVHIRRNVYLVKKKRSDADDGAGCTSCSSNSTCSDDCVCRVQCISCSKACRCSEYCNNRPFRKDKKIKIVKTELCGWGVEAAETINKGEFIIEYIGEVIDDALCEKRLWDMKYKGEQNFYMCEIRKDFTIDATFKGNTSRFLNHSCDPNCVLEKWQVDGETRVGVFAARPIEVGEPLTYDYRFVQFGPEVKCYCGATNCQGFLGTKKKIDKVNLCWGSKRKRTSAACIAIVTAV 501
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere14g0033 501 SMART PHD_3 173 218 IPR001965 -
Dere14g0033 501 SMART PHD_3 124 172 IPR001965 -
Dere14g0033 501 SUPERFAMILY SET domain 257 468 IPR046341 -
Dere14g0033 501 ProSiteProfiles SET domain profile. 332 449 IPR001214 GO:0005515
Dere14g0033 501 ProSiteProfiles AWS domain profile. 286 332 IPR006560 GO:0005634|GO:0042054
Dere14g0033 501 ProSiteProfiles Histone-lysine N-methyltransferase (EC 2.1.1.43) family profile. 1 500 IPR025787 -
Dere14g0033 501 Pfam SET domain 343 448 IPR001214 GO:0005515
Dere14g0033 501 Gene3D SET domain 246 490 IPR046341 -
Dere14g0033 501 ProSiteProfiles Post-SET domain profile. 455 471 IPR003616 -
Dere14g0033 501 CDD SET_ASHR3-like 333 471 - -
Dere14g0033 501 PANTHER SET DOMAIN PROTEINS 79 489 - -
Dere14g0033 501 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 119 221 IPR013083 -
Dere14g0033 501 SMART set_7 332 455 IPR001214 GO:0005515
Dere14g0033 501 SMART PostSET_3 455 471 IPR003616 -
Dere14g0033 501 FunFam Histone-lysine N-methyltransferase 245 482 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere14g0033 Dere-ChrDere14 410292 421546 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere14g0033 313 470 C2H2 Transcription Factor Family AT2G23740 36.313 3.33e-24 105
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Dere14g0033 SET 3.3e-19 No_clan