Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere14g0028 ATGGCTCCTCGTCGGGTTTTTCTTCTTTTCTTCGTTCTCTCTTGTTCTGGACTCTCTTTCTCTTTCGAGCCTCGCAACCACGAAGTGGAGGCTTTGATGAGCATAAGAGCATCTCTGAATGATCCGCATGGGGTATTAAGCAACTGGGATGAATACTCAGTCGACCCTTGCAGTTGGTCTATGATCACGTGCTCTTCTGATTCTCTTGTTATAGGCCTGGGAGCGCCAAGCCAATCTCTTTCTGGAACTTTATCCGGAGCCATAGGAAATCTGACAAATCTTCGACAAGTGTTACTGCAGAACAACAATATATCTGGCGAAATCCCACCGGAACTTGGTACCCTTACTAAGCTACAGACTTTAGATCTTTCCAATAATCGATTCTCTGGTGTGATTCCAAGGTCTTTAAGTCACTTGGAAAGTCTCCAGTACCTGAGGCTGAACAATAATAGTTTGTCTGGGCCTTTTCCAGTGTGGCTAGCCAAAATCCCACATCTTGCTTTCTTGGACTTGTCTTATAACAATCTCAGTGGACCATTGCCCAAGTTTCCAGCCAGATCTTTCAATGTTGCGGGAAACCCTTTGATTTGTGGAAGTAGTTCTACTGAAGGTTGCTCTGGATCAACCACCCTCATGCCTGTTTCCTTGTCTCTGCCATCGTCACAAGGAGAGCACAAGTCTAAGAAAATAGCAATTGCACTTGGGGTCAGCCTTAGCTGTGCCTGTCTCATACTCCTTTCTTTAGGGCTCTTATGGTATAGAAAGAAAGGACAGCACCGGGCACTTTTGTATATCAGTGATTATCAAGAAGAGGGACTTGTTAGCTTGGGTAATCTCAATATCTTCACTTTCAGAGAGCTCCAACATGCAACAGATAATTTCAGCTCCAAGAACATACTTGGTGCTGGAGGTTTTGGCAATGTGTATAGAGGAAGGCTTGGTGATGGGACAATGGTAGCAGTGAAGAGGCTGAATGATGTGACTGGAAGTGCTGGGGAATCGCAGTTCCGAACAGAATTGGAGATGATCAGCTTGGCAGTTCACCGCAATTTACTTCGCTTAATTGGATATTGTGCTACTCCCAATGAGAAGCTTCTGGTTTATCCTTACATGTCTAATGGAAGCGTGGCCTCCAGGCTTAGAGGCAAACCTGCTTTAGATTGGAACACAAGAAAAAGTATAGCGATTGGAGCTGCCAGGGGTCTTCTGTATCTGCATGAGCAGTGTGATCCAAAGATAATACACAGAGATGTTAAAGCTGCTAATGTGCTTCTGGATGAGTACTTTGAGGCCGTTGTTGGTGATTTTGGCCTTGCAAAGCTCCTTGATCATGCTGATTCTCATGTCACTACAGCTGTCCGTGGCACTGTAGGCCACATTGCACCAGAGTACCTCTCCACTGGCCAATCATCTGAGAAAACTGATGTTTTCGGATTTGGCATTCTCTTGTTGGAGCTCATAACTGGAATGACGGCTCTGGAGTTTGGGAAAACAGTGAATAAAAAAGGTGCAATGCTAGAGTGGGTTAAGAAAATACAGCAGGAAAAGAAGGTGGAAGTGTTGGTGGACAAAGAGCTAGGGAGAAACTATGACAGGATAGAGGTAGGGGAGATGCTGCAAGTAGCTTTACTTTGCACTCAATTCCTTCCGGCCCACCGCCCCAAAATGTCGGAAGTGGTCAGAATGCTAGAAGGCGATGGTCTTGCCGAGAAGTGGGCAGCTTCACACAATCATGGTAATCTCAGCATGAACAACGCCTTTCACAGTAACAGTATCAATAGTTCATCTTCTCGCCCAACCACCATAACAGCATCAAGACACGATGATTATAATGCTCATGATCGTTCCAGCATGTTTGGCATGGGACTGGATGGTGATGATGATGATGACCACTCTTTGGATTCCTATGCCATGGAACTCTCTGGCCCTAGATAA 1935 0.4543 MAPRRVFLLFFVLSCSGLSFSFEPRNHEVEALMSIRASLNDPHGVLSNWDEYSVDPCSWSMITCSSDSLVIGLGAPSQSLSGTLSGAIGNLTNLRQVLLQNNNISGEIPPELGTLTKLQTLDLSNNRFSGVIPRSLSHLESLQYLRLNNNSLSGPFPVWLAKIPHLAFLDLSYNNLSGPLPKFPARSFNVAGNPLICGSSSTEGCSGSTTLMPVSLSLPSSQGEHKSKKIAIALGVSLSCACLILLSLGLLWYRKKGQHRALLYISDYQEEGLVSLGNLNIFTFRELQHATDNFSSKNILGAGGFGNVYRGRLGDGTMVAVKRLNDVTGSAGESQFRTELEMISLAVHRNLLRLIGYCATPNEKLLVYPYMSNGSVASRLRGKPALDWNTRKSIAIGAARGLLYLHEQCDPKIIHRDVKAANVLLDEYFEAVVGDFGLAKLLDHADSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGMTALEFGKTVNKKGAMLEWVKKIQQEKKVEVLVDKELGRNYDRIEVGEMLQVALLCTQFLPAHRPKMSEVVRMLEGDGLAEKWAASHNHGNLSMNNAFHSNSINSSSSRPTTITASRHDDYNAHDRSSMFGMGLDGDDDDDHSLDSYAMELSGPR 644
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere14g0028 644 FunFam Somatic embryogenesis receptor kinase 1 264 370 - -
Dere14g0028 644 PRINTS Leucine-rich repeat signature 163 176 - -
Dere14g0028 644 PRINTS Leucine-rich repeat signature 118 131 - -
Dere14g0028 644 FunFam Somatic embryogenesis receptor-like kinase 1 371 583 - -
Dere14g0028 644 ProSitePatterns Serine/Threonine protein kinases active-site signature. 413 425 IPR008271 GO:0004672|GO:0006468
Dere14g0028 644 ProSitePatterns Protein kinases ATP-binding region signature. 300 322 IPR017441 GO:0005524
Dere14g0028 644 SUPERFAMILY Protein kinase-like (PK-like) 276 564 IPR011009 -
Dere14g0028 644 SMART serkin_6 294 549 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere14g0028 644 SUPERFAMILY L domain-like 26 196 - -
Dere14g0028 644 Gene3D Ribonuclease Inhibitor 25 207 IPR032675 -
Dere14g0028 644 Gene3D Transferase(Phosphotransferase) domain 1 371 582 - -
Dere14g0028 644 PANTHER SOMATIC EMBRYOGENESIS RECEPTOR KINASE 1 6 574 - -
Dere14g0028 644 Pfam Leucine rich repeat 117 176 IPR001611 GO:0005515
Dere14g0028 644 Pfam Leucine rich repeat N-terminal domain 26 65 IPR013210 -
Dere14g0028 644 Gene3D Phosphorylase Kinase; domain 1 264 370 - -
Dere14g0028 644 MobiDBLite consensus disorder prediction 619 644 - -
Dere14g0028 644 Pfam Protein tyrosine and serine/threonine kinase 297 563 IPR001245 GO:0004672|GO:0006468
Dere14g0028 644 ProSiteProfiles Protein kinase domain profile. 294 549 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere14g0028 644 FunFam Putative LRR receptor-like serine/threonine-protein kinase 25 207 - -
Dere14g0028 644 SMART LRR_typ_2 115 138 IPR003591 -
Dere14g0028 644 SMART LRR_typ_2 139 170 IPR003591 -
Dere14g0028 644 SMART LRR_typ_2 91 113 IPR003591 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere14g0028 Dere-ChrDere14 360967 366017 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere14g0028 7 644 Receptor kinase-like Gene Family AT5G16000 63.735 0.0 803
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-II Dere14g0028 Pkinase 1.9e-41 CL0016