Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere13g2124 ATGGACACACACACTCACTCACTCTCACATAGGAGACAAGTGATACTAGGGGGTACAAAAGAGGTGAAGCGTGGCAGAGAAAAAGGAGGTGGTGCTAAAAAGTGGAAAGGCAAAATGCAAAAGGGGCGTAGTATTGGTATTGATGTTGCTAAGAGCAACAGCAGCTCTGAACCTTCAACTTCTTACAGTTGTTGGAAAGTTGCAAGTCTCACTGAAACTATACTGGACACAAAGCAGTCTGCAAATTTGAAAGATCGTTACGCTCTTGGTGAGCAGTTAGGTTGGGGACAGTTTAGTGTTATTAGGGCGTGCATTGACAAGCTGACTGGAGAGGTTTTGGCCTGCAAATCAATTGCTAAAGATAGATTGGTTACCTCAGATGATCTGCGAAGTGTCAAACTAGAGATTGAGATAATGGCTAGGTTATCAGGGCATCCAAATGTTGTAGATCTCAAGGCAGTTTATGAAGAGGAGGATTTTGTTCATCTGGTGATGGAGCTTTGTGCTGGAGGTGAACTGTTTCACCGGCTAGAGAAGGCTTCAAAAATTGGGGTAAAAGGTCTAGAGTACAAAAACACTCGTAAACTCCTCAAGTCCACCACGGAGGATTTGAGTCCAGTGGTTGAACAGATCGAACAATACATTAAGGAGATGGATCACCCAACTGAAGAAGTGCAGAAACTGAAAGGGATATTGGCCGCAAGCCAACAGATGCAGCACCAAAGGGTGTCTGTCAATGATGAAGGTCGAGATGTGTGGAAGGATGCTTTGAGAACATTTTTACTGCGGAAGCTTGATAGTTTAGCAAAAGATGATAAATGCCAAATAACGATGATATCGACATGGGCAACTGAGTTATACTTGGACAACAAGGAGAAGCAAAAAAAAGCATTGGAAGTGCTTCAGAAACCTGCTGTGCCAGTAGACCTTAAGTACAAGTTCGCTCCAGACCTTATTTCCCTTGATGCATATGAAACTGTGGAGTCATGGATGGCTACCAAGAACCTGAACCCAAGGAAACTAATTCCTGCAATGATGCGTTATTCAAGTGAACCTCATGCTAAGAACGAGACACATGAAGTCATAAAATATTTTGAATATTGTGTTCATATATTGCAAAATGATGACCCTGGAATTCATAACTTGCTGTTTTCCTTATATGCAAATCAGATGATAGTGCACTTCTGCGATTCCTACAATGCAAATTTGGAAAAGGACAATAGAATGGACCTGAATTTTTCTACGATCCTAAGTATGCTCTATGTCTTTGCCTAA 1275 0.418 MDTHTHSLSHRRQVILGGTKEVKRGREKGGGAKKWKGKMQKGRSIGIDVAKSNSSSEPSTSYSCWKVASLTETILDTKQSANLKDRYALGEQLGWGQFSVIRACIDKLTGEVLACKSIAKDRLVTSDDLRSVKLEIEIMARLSGHPNVVDLKAVYEEEDFVHLVMELCAGGELFHRLEKASKIGVKGLEYKNTRKLLKSTTEDLSPVVEQIEQYIKEMDHPTEEVQKLKGILAASQQMQHQRVSVNDEGRDVWKDALRTFLLRKLDSLAKDDKCQITMISTWATELYLDNKEKQKKALEVLQKPAVPVDLKYKFAPDLISLDAYETVESWMATKNLNPRKLIPAMMRYSSEPHAKNETHEVIKYFEYCVHILQNDDPGIHNLLFSLYANQMIVHFCDSYNANLEKDNRMDLNFSTILSMLYVFA 424
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere13g2124 424 MobiDBLite consensus disorder prediction 1 37 - -
Dere13g2124 424 Pfam Protein kinase domain 87 184 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere13g2124 424 Gene3D Phosphorylase Kinase; domain 1 89 176 - -
Dere13g2124 424 ProSiteProfiles Protein kinase domain profile. 87 383 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere13g2124 424 MobiDBLite consensus disorder prediction 16 34 - -
Dere13g2124 424 ProSitePatterns Protein kinases ATP-binding region signature. 93 120 IPR017441 GO:0005524
Dere13g2124 424 PANTHER SERINE/THREONINE-PROTEIN KINASE 71 186 - -
Dere13g2124 424 FunFam Aurora kinase A 78 171 - -
Dere13g2124 424 SUPERFAMILY Protein kinase-like (PK-like) 85 181 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere13g2124 Dere-ChrDere13 28699572 28702199 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere13g2124 51 177 EF-hand Containing Proteins AT3G10660 46.154 1.23e-29 119
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Dere13g2124 Pkinase 3.4e-18 CL0016