Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere13g2101 ATGATTACTTGGCCAGAGGTGAGAACATTCCATTTTGACCCTTTTGACAAGAAAGCATCCTCCTTCCTCCATGGAGCCCGTCCTGCTGGCACACCCAAAATCCAATTTCCACCAATCAGAGCCTCCGTCCGTTGCTGGTTGCTTCCGCTTTTTCTCCCCGTCTCCGCCGGTATCTCTTATGCTCACCAGCCATGCACTATTTCTAGGGTTTCCCGGAGCTGCTCCGCTTTCGCAGACATGTCCCGCCAGACCCCCACCTCCGCCTTTACTAAATCCAAGACCCTCGACAATAAATATATGCTGGGAGATGAGATCGGGAAAGGAGCATATGGTCGAGTTTACAAAGGTTTGGACCTAGAGAATGGAGACTTTGTTGCAATTAAACAAGTTTCTTTGGAGAATATTGCTCAGGAGGATCTCAACATCATCATGCAAGAGATCGATTTGTTGAAGAATTTGAACCACAAAAACATTGTAAAATATCTTGGATCCTTAAAGACAAAGACTCACCTCCACATTATTCTTGAGTATGTGGAGAATGGCTCACTTGCTAATATTATCAAGCCAAATAAATTTGGACCATTTCCGGAATCATTGGTTGCTGTATATATTGCCCAGGTTTTGGAAGGCTTGGTTTATCTACATGAACAGGGTGTGATCCATAGGGATATCAAGGGTGCAAACATATTGACAACCAAAGAGGGACTGGTCAAACTTGCTGATTTTGGTGTTGCAACAAAGTTAACTGAGGCTGATGTTAATACTCATTCAGTTGTTGGAACTCCATATTGGATGGCTCCAGAGGTTATAGAAATGTCTGGGGTTTGTGCTGCTTCTGACATTTGGAGTGTGGGCTGTACTGTTATTGAACTTCTTACATGTGTGCCTCCGTATTATGATCTACAGCCTATGCCAGCTCTCTTTCGTATTGTTCAGGATGAGCATCCTCCCATTCCTGATAGCCTGTCTCCTGATATCACTGATTTTCTGCGTCAATGCTTTAAGAAGGATGCTAGACAAAGACCTGATGCTAAAACGCTTCTATCTCACCCATGGATACAAAATTGTAGGCGTGTCCTGCAGTCATCTCTTCGGCATAGTGGAACATTAAGAAATATAGAGGAAGATGATTCCACAGATGCAGCAGTTTCTGGTGATGATCAGAAGAGTGCTGGTGAAGGCTCTTCTGGGGAGAAAGTGGTTAGTGTTGATGTTATTAAAGCTGACCCCGCTAAAGAGTTGTCAATTGAGGTTGCTGGTAGCAGCAAACATCATGAGGACATAGGTTCTGATTCTGATTTTCTCAATGAGAAAACAGAAAAGCATGATGATGTTTTTTCTGATCAAGTTCTCACTTTAGCTATTCATGAGAAGTTGTCTCTACAAACTGGATCTAGCAAACACTGTTCTAATGGAGAAGTTGCTAGTCCTGAGGTGACTGGGGATCGTGACTTTCCAAATACTAAAGACCATAACCAAATGACAATGAATGGAGAAGTTGGATCTCCAGAATCAAGAGGGATAGATAGAAATCCTGGAGGAAAAGGCAGTTCTGTCACCAATGGCAGTATATCGTTCTGTTTTGGACCAAGAGGTCAAGATAATAGTTCCCTAAAGGTGTTGTCAAAAGCAGCTGATGTGGCTGCATTAGCACTAGCATTTATTAAGTTTCTAGTTCCCTTACAGTCACAAAGAAATTCTGTTTCTTTGTAG 1713 0.4273 MITWPEVRTFHFDPFDKKASSFLHGARPAGTPKIQFPPIRASVRCWLLPLFLPVSAGISYAHQPCTISRVSRSCSAFADMSRQTPTSAFTKSKTLDNKYMLGDEIGKGAYGRVYKGLDLENGDFVAIKQVSLENIAQEDLNIIMQEIDLLKNLNHKNIVKYLGSLKTKTHLHIILEYVENGSLANIIKPNKFGPFPESLVAVYIAQVLEGLVYLHEQGVIHRDIKGANILTTKEGLVKLADFGVATKLTEADVNTHSVVGTPYWMAPEVIEMSGVCAASDIWSVGCTVIELLTCVPPYYDLQPMPALFRIVQDEHPPIPDSLSPDITDFLRQCFKKDARQRPDAKTLLSHPWIQNCRRVLQSSLRHSGTLRNIEEDDSTDAAVSGDDQKSAGEGSSGEKVVSVDVIKADPAKELSIEVAGSSKHHEDIGSDSDFLNEKTEKHDDVFSDQVLTLAIHEKLSLQTGSSKHCSNGEVASPEVTGDRDFPNTKDHNQMTMNGEVGSPESRGIDRNPGGKGSSVTNGSISFCFGPRGQDNSSLKVLSKAADVAALALAFIKFLVPLQSQRNSVSL 570
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere13g2101 570 MobiDBLite consensus disorder prediction 464 517 - -
Dere13g2101 570 Gene3D Transferase(Phosphotransferase) domain 1 96 391 - -
Dere13g2101 570 PRINTS Tyrosine kinase catalytic domain signature 322 344 IPR001245 GO:0004672|GO:0006468
Dere13g2101 570 PRINTS Tyrosine kinase catalytic domain signature 175 188 IPR001245 GO:0004672|GO:0006468
Dere13g2101 570 PRINTS Tyrosine kinase catalytic domain signature 279 301 IPR001245 GO:0004672|GO:0006468
Dere13g2101 570 PRINTS Tyrosine kinase catalytic domain signature 213 231 IPR001245 GO:0004672|GO:0006468
Dere13g2101 570 Pfam Protein kinase domain 100 353 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere13g2101 570 SUPERFAMILY Protein kinase-like (PK-like) 84 366 IPR011009 -
Dere13g2101 570 ProSitePatterns Protein kinases ATP-binding region signature. 105 128 IPR017441 GO:0005524
Dere13g2101 570 CDD STKc_Cdc7_like 98 353 - -
Dere13g2101 570 ProSiteProfiles Protein kinase domain profile. 99 353 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere13g2101 570 MobiDBLite consensus disorder prediction 370 400 - -
Dere13g2101 570 ProSitePatterns Serine/Threonine protein kinases active-site signature. 219 231 IPR008271 GO:0004672|GO:0006468
Dere13g2101 570 PANTHER MAP KINASE KINASE KINASE SSK2-RELATED-RELATED 77 378 - -
Dere13g2101 570 SMART serkin_6 99 353 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere13g2101 570 FunFam MAP3K epsilon protein kinase 1 96 385 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere13g2101 Dere-ChrDere13 28311052 28325224 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere13g2101 80 553 MAP Kinase Kinase Kinase AT3G13530 67.635 0.0 616
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE-Pl Dere13g2101 Pkinase 1.7e-73 CL0016