Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere13g2085 ATGGCCCTTGGGGTCCCACTACCCTCAAACCTTGCATTCGACAGGGCAAGTCCTGAATGGATGAACAAAGCAGATAATGCGTGGCAGCTCACTGCTGCAACATTAGTAGGGCTTCAATGTGTACCTGGTCTCATAATCTTATATGGGGGAGCAGTGAAGAAGAAATGGGCAGTGAACTCAGCCTTCATGTCCCTCTATGCTTTTGCATGTGTTTTCTTCTGTTGGGTGATATGGGGTTACAGACTGTCATTTGGGGAAAAGCTTCTTCCATTCTGGGGAAAGCCTGCTCTTTCAGTGGACGAGGAATACCTTTTCACAAAGGCTTTTTCTGGGTTATTCCCAAATGCCACAATGATGTATTTCCAAGGTGTATTTGCTTGCATCACTTTGATTTTGATTGCCGGGGCCGTCTTGGGTCGCATGAATTTCTATGCATGGATGCTGTTTGTGCCTCTTTGGCTCACCTTCTCCTACACCTTCACTGCTTTCAGTATTTGGAGTCCTAATGGGTTCCTCTTCAAGCTAGGAATAATAGATTACTCTGGTGGATATGTGATTCATCTGTCATCCGGGGTGGCTGGATTCACAGCAGCATATTGGGTTGGTCCAAGGCTAAACAAGGACAGAGAAAGGTTTCCTCCAAACAACATACTACTGATGTTGGCAGGGGCAGGGTTGCTGTGGATGGGATGGACAGGATTCAACGGAGGAGACCCTTATGTGGTGAGCATGGATGCTTCCTTGGCTGTCTTAAACACACATGCCTGCACTGCCACTAGCTTGCTGACTTGGGTCATCCTTGACGTCATCTTCTTCCGTAAGCCTTCCGTCATTGGTGCTGTTCAAGGCATGATCACTGGCTTGGTTTGCATTACCCCTGCTGCAGGGGTTGTGCAAGGATGGGCAGCACTTTTAATGGGAATATTCTCAGGCTCAATTCCATGGTTCACCATGATGGTTGTCCACAAGAAATCAAAGCTCCTTCAGAAGGTGGACGACACTATGGCTGTGTTGCACACTCACGCCATTGCTGGGTCCCTCGGAGGAATCCTCTCAGGCCTCTTCGCTGAGCCCAAGCTCAACTTGCTCTTCTATGCATCCTATGGTCAATACGTTGGCCTCTTCTATGGCTTCCAAATGAACGACATCAAAACCGGGGTTCGACAAATGGGGATCCAACTGCTTGGGATTCTGTTTGTCGTCCTGCTTAATGTCATTAGCACAAGCTTGATATGTCTGTTTGTTCGACTGTTGGTGCCTTTAAGGATGTCTGAAGAGGACATGGAGATAGGCGATGAGGCTGCTCATGGAGAAGAAGCATATGCTATATGGGGTCAGGGTGATAAGCTTGACAGTTCCGTCTCAAAGTATGGAAGTTCGTTGTACGACGATGTTGAAGCAGCTGGGGAAAGGAAAAAACGTGCAGGTCAGGTTGAGATGATGTAG 1446 0.4786 MALGVPLPSNLAFDRASPEWMNKADNAWQLTAATLVGLQCVPGLIILYGGAVKKKWAVNSAFMSLYAFACVFFCWVIWGYRLSFGEKLLPFWGKPALSVDEEYLFTKAFSGLFPNATMMYFQGVFACITLILIAGAVLGRMNFYAWMLFVPLWLTFSYTFTAFSIWSPNGFLFKLGIIDYSGGYVIHLSSGVAGFTAAYWVGPRLNKDRERFPPNNILLMLAGAGLLWMGWTGFNGGDPYVVSMDASLAVLNTHACTATSLLTWVILDVIFFRKPSVIGAVQGMITGLVCITPAAGVVQGWAALLMGIFSGSIPWFTMMVVHKKSKLLQKVDDTMAVLHTHAIAGSLGGILSGLFAEPKLNLLFYASYGQYVGLFYGFQMNDIKTGVRQMGIQLLGILFVVLLNVISTSLICLFVRLLVPLRMSEEDMEIGDEAAHGEEAYAIWGQGDKLDSSVSKYGSSLYDDVEAAGERKKRAGQVEMM 481
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere13g2085 481 ProSitePatterns Ammonium transporters signature. 179 204 IPR018047 GO:0008519|GO:0016020|GO:0072488
Dere13g2085 481 PRINTS Rhesus blood group protein signature 249 271 IPR002229 GO:0005886
Dere13g2085 481 PRINTS Rhesus blood group protein signature 218 236 IPR002229 GO:0005886
Dere13g2085 481 PRINTS Rhesus blood group protein signature 122 138 IPR002229 GO:0005886
Dere13g2085 481 PANTHER AMMONIUM TRANSPORTER MEP2 9 452 IPR001905 GO:0008519|GO:0016020|GO:0072488
Dere13g2085 481 FunFam Ammonium transporter 10 444 - -
Dere13g2085 481 Pfam Ammonium Transporter Family 27 441 IPR024041 GO:0008519|GO:0016020|GO:0072488
Dere13g2085 481 Gene3D Ammonium transporter AmtB like domains 9 445 IPR029020 -
Dere13g2085 481 SUPERFAMILY Ammonium transporter 20 423 - -
Dere13g2085 481 NCBIfam ammonium transporter 25 441 IPR001905 GO:0008519|GO:0016020|GO:0072488
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere13g2085 Dere-ChrDere13 28024440 28026369 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere13g2085 116 468 Inorganic Solute Cotransporters AT2G38290 61.190 2.46e-144 416