Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere13g2030 ATGGCTCCGAAACGCGCTTCTCCTTTGGATGAACCACCCACGGCTTCGTCATCGTCCGAAGAAGAGGAAGCTTCATCCGAAGAAGTGGAATCTTCATCTGAGGAAGAAGAGGATGATCAACCCGCGAAACCATCACTCCCTTCGCCACCCCTTGCTGCTGAGAAGAAACCTACTGTCAAAAAACATCCATCTGCTGCTACAAGCACAAAACCTCAACCAAAGCCTGTAGTTTCAGATTCTGAGACGGAATCTGATTCCGGATCTGACTCCGAAGATAAGCGACCTCGTGTGAATACGGACTCTGTTGTTAAACCGATTGCGTCCAAGCCCATGGAAGATACTTCAAAGGCCAAGAAGCCAAAGTCTCAGCCTTCAGCGACGCCGACCAAATCGGCGACAAAGCGACCGAGTGAGGATAATCGGTCAGAAGGTGACTCGAAAAGGGCAAAGAAGAAGGGCAAGGAGGCTGCAGGAGACGACGTCATCCCAGTGGCAGAGGATGATGGGAGAAAGGCTGGGGATGAGTCAAAGAAGTTATTTCAGAGGCTATGGAGTGAGGATGATGAAATTGCGATACTAAAAGGTATGTCTGAATATGCAGCGAAGACTGGATCAATTCCAAATAAAGATATCAATGCATTTCATGATTCCATTAGGAAGTCGGTCCATGTTGATGTTTCAAACGAACAGTTGTCAAATAAGATTCGAACATTGAAAAAGAAGTATTCGAAAAATGCAGCGAGAAGCAAAAACGGTGAAGATCCTACTTTTTCGAAACCGCACGAGAGGAAAGTGTATGAATTGTCAAAGAAGGTTTGGGCCACCGAAGTAGTCAATGGAGGAATGGACTTGACAAAGTCTAATGGGAAAGATAAGAAGAATCGGAAGGAAGGCAGTAGTATTGTGCCTTCTTTGAAACCAAAAGCTGAACTGGATTCAAAGGAAGTTAGAAAGATTGATATAGATCAAAATCCCAGTTCACTGCTGAGTTTAAATGAAATGATTAGATTTAACAAAAATCTGGGTCTGTCTGGTTTGGATGAGGATACTATAAAGATGGGTTTTGAATTTATAGAAGCACCAAAGAAGGCAGAATTGGAGAATAGGTGTAAGAAACTTCAAGTTGCTGAATTGGAATTGTTTGTAAAGCGGGTAGAATTAGTTAAGGATGCGGCTAGCTTGATCTGGGAAGCCTACAAGTCATCAGACAATTAA 1215 0.4354 MAPKRASPLDEPPTASSSSEEEEASSEEVESSSEEEEDDQPAKPSLPSPPLAAEKKPTVKKHPSAATSTKPQPKPVVSDSETESDSGSDSEDKRPRVNTDSVVKPIASKPMEDTSKAKKPKSQPSATPTKSATKRPSEDNRSEGDSKRAKKKGKEAAGDDVIPVAEDDGRKAGDESKKLFQRLWSEDDEIAILKGMSEYAAKTGSIPNKDINAFHDSIRKSVHVDVSNEQLSNKIRTLKKKYSKNAARSKNGEDPTFSKPHERKVYELSKKVWATEVVNGGMDLTKSNGKDKKNRKEGSSIVPSLKPKAELDSKEVRKIDIDQNPSSLLSLNEMIRFNKNLGLSGLDEDTIKMGFEFIEAPKKAELENRCKKLQVAELELFVKRVELVKDAASLIWEAYKSSDN 404
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere13g2030 404 MobiDBLite consensus disorder prediction 21 37 - -
Dere13g2030 404 MobiDBLite consensus disorder prediction 134 176 - -
Dere13g2030 404 Coils Coil 228 248 - -
Dere13g2030 404 MobiDBLite consensus disorder prediction 1 176 - -
Dere13g2030 404 MobiDBLite consensus disorder prediction 62 83 - -
Dere13g2030 404 Pfam Protein of unknown function, DUF573 180 273 IPR007592 GO:0006355
Dere13g2030 404 MobiDBLite consensus disorder prediction 241 260 - -
Dere13g2030 404 PANTHER BNAANNG10740D PROTEIN-RELATED 12 390 IPR007592 GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere13g2030 Dere-ChrDere13 27458538 27459752 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere13g2030 4 401 GeBP Transcription Factor Family AT1G61730 31.796 5.12e-35 131
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GeBP Dere13g2030 DUF573 1.4e-34 CL0123