Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere13g1990 ATGGTTAATATTTTGGCGGAGGCACAGTCGAAAATTCAGGGAGTAGCATTTCTTTCATCAGAACTTAAACGGTCTCTTGTTCATAATACTTTGGTCGCCATTTGTTTGCCAGGAAGCCAAGTTCCTGACTGGTTTAACTACCAAACAGTGGATTCAAGTGTGACCGTTCCACTTAATGTGCGTTCATTCATTGATTTGAAGCCGCTTCGATTCGCATTTTGCCTTGTTCTTGATGCACCATCACCCCGCAGAGACAATTACATTCGTGCATTGAGTATTGGGTGTACTTGCTATTTGAAAACAAGGATTGGGCAAAGACGAAGGGTTGAGCACGTATCGATGTTATCACAAACTCGGCGAGTGTTTTGTGCTTCAGACCATGCGTATATATGGTACGATGACCTCTTTTGTCGGGACATACTGAGCACAGCGAAACAAAGGAAGCTGTCATCCAGTAAAGTAGATATCCATAGAACTGGGAGTGATGCAGTGGAAGGCATATTCTTGGATATGTCCAGAATTAAAGAAGTAAATCTGAGGCCTGACGTTTTTGACAAGATGTATAATTTACGATTTCTCAGTTTCTGTGCTTCATATGATGAAAAATGTAACGTGCACTTTCCTCATGGTCTTAATACTCTGTCTGATGAACTAATAATTCTCCACTGGGAACAGTACCCTCTGAAGTTCTTGCTACTGACATATTGTCCTGAGGGGCTTATGGAACTTAACTTGTCACATAGTTGCATTGTAAAGCTCTGGGACGGAGTTGAGAATCTTGAGAATTTAAGGAAATACTTAAATTTAGGTGGAACAGCAATCAAGGAATTGCCATCATCCATTGAGAATCTTGAGAGGCTTACTGAACTGGTGCTTAATTCATGCAGTAATATTGAGAACTTGCCTGCAAGCATCAGAGATCTTCCTCGGCTGAAAAGTCTTGTGCTTAAAGATTGCAAGAGGCTTTGGAATTTACCACTGCTTCCATCATCTATACAAAAGTTGAATGCAACAAACTGTATACCTTTGATGATAGTGTCAAATTTCTCTTCAAGTGCTGCGCTCAATCATGATTCTTTGAGAGCATTGGACAATATTCTGGACGATGCATTGTCTAGAATTCAAAGAGCAGCATATCTTTCATCAGCACTAGAAATGTCTGAAGTTGATAGTAGTTTGGTTCAATTTTGTTTACTGGGAAGTCAAGGTCCAGACTGGTTTAGCTATAAAACCAAAAATAATTCTTTAGCCATTCAAAATCCTGCATATTCTGTCACTGAGCTGGAGTTATTATGCTTCGTATTTTGCATTGTTCTTGACACATCTTGTGTAAATGATAGTAGTCATGCTTTGAGAATTGAATTCAAATGCCATTTTGATGCAAACTGTGACGAAAGTCAAACAATTGATTATTCTTCTGAACCATCATTCTTTGAACCCCCAATTTTTCATTCAGACCATGTTTACATATGA 1473 0.391 MVNILAEAQSKIQGVAFLSSELKRSLVHNTLVAICLPGSQVPDWFNYQTVDSSVTVPLNVRSFIDLKPLRFAFCLVLDAPSPRRDNYIRALSIGCTCYLKTRIGQRRRVEHVSMLSQTRRVFCASDHAYIWYDDLFCRDILSTAKQRKLSSSKVDIHRTGSDAVEGIFLDMSRIKEVNLRPDVFDKMYNLRFLSFCASYDEKCNVHFPHGLNTLSDELIILHWEQYPLKFLLLTYCPEGLMELNLSHSCIVKLWDGVENLENLRKYLNLGGTAIKELPSSIENLERLTELVLNSCSNIENLPASIRDLPRLKSLVLKDCKRLWNLPLLPSSIQKLNATNCIPLMIVSNFSSSAALNHDSLRALDNILDDALSRIQRAAYLSSALEMSEVDSSLVQFCLLGSQGPDWFSYKTKNNSLAIQNPAYSVTELELLCFVFCIVLDTSCVNDSSHALRIEFKCHFDANCDESQTIDYSSEPSFFEPPIFHSDHVYI 490
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere13g1990 490 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 145 384 IPR044974 GO:0006952
Dere13g1990 490 Gene3D Ribonuclease Inhibitor 137 357 IPR032675 -
Dere13g1990 490 Pfam C-JID domain 36 138 IPR045344 -
Dere13g1990 490 SUPERFAMILY L domain-like 167 352 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere13g1990 Dere-ChrDere13 27055048 27060517 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere13g1990 154 335 WRKY Transcription Factor Family AT4G12020 38.318 3.61e-29 120