Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere13g1989 ATGGTGAACTCGAGAAAGATTGAAGAAGAACCAACCATCTGCTTCTCTGTGTTCATCTTCTTCTTGTTTCACTTTCAACATCTGTTTACTTCCACCGTGACCTCCGACACTCCTGAAGATAATTTTGCTATTAATTGTGGCTTCTCAGGCAAGTCATACACCACTTCAGAATCAGATCACAGAAAATGGAAACCTGATGATGGTTCCAAAGTACTTTCTCTTGGTCAAAACAGCCAGACTTCAATCCCTGCTGATGCAGTAAATGTTCCTTCATCATTGGAGAAAGCTCCTTACGCCACTGCACGCCTGTCTCGTTCTGAGTTCACCTACTCCTTTCCGGTCACTGATGGCCAAAAGTTTGTTCGCCTTTTCTTTTACCCAGCTTTCTATGCCAGCTTTGATCGTTCCGATGCTCTCTTCTCTGTTAAAGCAGGCCACCACACTCTTCTTAAGGACTTCAATGCATCAATGACTGCTGACAACGATGAAGATCCTGCAGAAACAGTGTTCAGAGAGTACTATGTCAAAGTGGAACCTGGTCACAGGCTGAACATAACCTTCACTCCCAGCACCACTTATCCAAAGGCCTATGCGTTTATCAATGGGATTGAGGTAGTGTCCATACCCAGCAATATTTATTACACAAAAGCAGATGACCAAGGGCTCAAGCTAGTTGGCCAAAGTAGTCAGTCTTGGGTTGACAACAACGCTGCTCTGGAGATGATATACAGAATCAATGTTGGAGGAGACGAGATTCCAGCTGACCAAGACACTGGTATGTTTCGTCGCTGGGATGATGATAATGGCTATGGCTACACGGCGATGCAGAACCTACAAAAACTCAAACCTGAGCCTGATTCAAACCTCACATACCCTGATGATCTTCCAGAAGACACTGCACCTAAGGAAGTCTACTTAACTGCACAGACCTCTAAATATAATATGACTTGGGAATTTGAAGTGGACCCAAAGTTTGTTTATATGATCAGACTACACTTCTGTGAGTTGGATACGAAAGTCCAGCAGGAAGATAGAGTTTTTCAGATACTCATAGCTGAAAGTTTAGCTGAGCCTCAGGCCGATGTGTTTCGTTGGCGAGGTAGTAGCCTAGTTCCTGTCTATAAGGACTATGCTGTTTTACTGAACCAAGGAAACATGAAGAAGCTGAACTTTTCAATCAAGTTACAGAAACTCCCAAAGAGCAAGTATGACGATGTCATACTGAATGGGATTGAAATTTTCAAGGTCAGTGATAGCAATGATAATCTTGGAGGACTCAATCCTGATACACACTCTCCACCGGGCAAACCATCAGAAAACTCGAGGAAAAGTATAAAATATCCCATGGTGATTGCCTTTGGTTGTGGGGCTTTAGGTGTCATTGTACTATCTGTCATCGGTTTTTTATTTTTCCGACGAATGAATAGAGCCCCAGTGAACAGGACACCGGGAAAATCATCAGATTTGTGCCGTTACTTTTCCATCACAGAGATCAGAGCTGCCACTAACAACTTTGATGATCTTTCAATCATTGGAGTTGGAGGTTTTGGTCATGTATATAAAGGACACATTGACCAGGGTAAGGCATCAACCGCTGTAGCCATCAAACGGCTCAAACCGGATTCACAACAAGGGGTCGATGAGTTCCAGACAGAGATCAAGATGTTGTCTCAGTTTCGCCATCCTCACTTGGTTTTGTGTGGAAGGCCACCAATACTTCATAGGGTGGAGAAGCAGGAGGGATGCCTAACTGACTGGGTTCGGCAATGCTATGAGAAGGGGGAAATTGATGAGGTAGTTGATCCACATTTGAAGGGAGTCATCATGCCTCGGTGTCTGAATAAGTTTGTTAAATTGGCATTGAATTGTCTGCATGATAATGGGAAGCTCCGGCCATCAATGAGAGATGTGGCGACTGGCCTAGAGACTGCATTAAAGATGCAAGGGAACACGGAGGAAGTGACCCTGAAAGACGCAAAAGCAAAGAGTGAGGACACAGCAACTTTGACCAGATTTAAAAGTGATGAAGAAAGTGATATGCAGTTCTCGACTTCAGATAGATCCATGACTGAGTCCAAGTGCAGCAGTAAGGTAACCATCACAAGTAGTGAGGAGGAACAAGCCTTGGTTCCTGCAGGGGTATTCTCCGAGCTTGCTAATCCAACAGCACGATAA 2175 0.4418 MVNSRKIEEEPTICFSVFIFFLFHFQHLFTSTVTSDTPEDNFAINCGFSGKSYTTSESDHRKWKPDDGSKVLSLGQNSQTSIPADAVNVPSSLEKAPYATARLSRSEFTYSFPVTDGQKFVRLFFYPAFYASFDRSDALFSVKAGHHTLLKDFNASMTADNDEDPAETVFREYYVKVEPGHRLNITFTPSTTYPKAYAFINGIEVVSIPSNIYYTKADDQGLKLVGQSSQSWVDNNAALEMIYRINVGGDEIPADQDTGMFRRWDDDNGYGYTAMQNLQKLKPEPDSNLTYPDDLPEDTAPKEVYLTAQTSKYNMTWEFEVDPKFVYMIRLHFCELDTKVQQEDRVFQILIAESLAEPQADVFRWRGSSLVPVYKDYAVLLNQGNMKKLNFSIKLQKLPKSKYDDVILNGIEIFKVSDSNDNLGGLNPDTHSPPGKPSENSRKSIKYPMVIAFGCGALGVIVLSVIGFLFFRRMNRAPVNRTPGKSSDLCRYFSITEIRAATNNFDDLSIIGVGGFGHVYKGHIDQGKASTAVAIKRLKPDSQQGVDEFQTEIKMLSQFRHPHLVLCGRPPILHRVEKQEGCLTDWVRQCYEKGEIDEVVDPHLKGVIMPRCLNKFVKLALNCLHDNGKLRPSMRDVATGLETALKMQGNTEEVTLKDAKAKSEDTATLTRFKSDEESDMQFSTSDRSMTESKCSSKVTITSSEEEQALVPAGVFSELANPTAR 724
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere13g1989 724 FunFam FERONIA receptor-like kinase 41 209 - -
Dere13g1989 724 Pfam Malectin-like domain 44 416 IPR024788 -
Dere13g1989 724 Gene3D Transferase(Phosphotransferase) domain 1 566 669 - -
Dere13g1989 724 SUPERFAMILY Protein kinase-like (PK-like) 566 639 IPR011009 -
Dere13g1989 724 Gene3D - 237 418 - -
Dere13g1989 724 Gene3D - 40 208 - -
Dere13g1989 724 SMART tyrkin_6 505 641 IPR020635 GO:0004713|GO:0006468
Dere13g1989 724 Pfam Protein tyrosine and serine/threonine kinase 510 566 IPR001245 GO:0004672|GO:0006468
Dere13g1989 724 SUPERFAMILY Protein kinase-like (PK-like) 491 565 IPR011009 -
Dere13g1989 724 Gene3D Phosphorylase Kinase; domain 1 477 565 - -
Dere13g1989 724 FunFam receptor-like protein kinase FERONIA 472 568 - -
Dere13g1989 724 FunFam FERONIA receptor-like kinase 237 417 - -
Dere13g1989 724 MobiDBLite consensus disorder prediction 683 702 - -
Dere13g1989 724 MobiDBLite consensus disorder prediction 665 702 - -
Dere13g1989 724 ProSitePatterns Protein kinases ATP-binding region signature. 511 536 IPR017441 GO:0005524
Dere13g1989 724 ProSiteProfiles Protein kinase domain profile. 505 724 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere13g1989 724 MobiDBLite consensus disorder prediction 665 682 - -
Dere13g1989 724 PANTHER OS03G0124300 PROTEIN-RELATED 15 477 IPR046957 GO:0004672
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere13g1989 Dere-ChrDere13 27037166 27039763 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere13g1989 565 724 Receptor kinase-like Gene Family AT3G51550 34.503 1.04e-22 102
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CrRLK1L-1 Dere13g1989 Malectin_like 7.9e-42 CL0202