Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere13g1986 ATGCGGGAAAAAATTGAAGATTCAATGTCGGATAAAGAAGAAATTCGAGGTGCAGATTCTTTTTCAAAGAAAGCAAAGGATCTGATAATTGAGGCGTACCCCATTCAGGGTTTGTCCATTGGAGGTCAAGAAACCTGCATAATTTTCCCCTCACTTAATACAGCTTTTGATATTGGTCGCTGCCCTCCCCGTGCTGTTTTTCAAGACTTCCTTCTTATCTCTCATTCTCACATGGATCACATTGGAGGACTGCCAATGTATGTTGCAACACGAGGCCTGTACCGTATGAAGCCCCCAACAATTATTGTACCAACATCCATAAAAGAGGATGTAGAGAAGCTCTTTGAGGTGCATAGGAAATTGGACCACTCGGAACTGAAGCACAATTTGGTTGGCTTGGATGTAGGAGAAGAGTTTTATTTGAGAAACGATCTTAAAGTAAAAGCTTTTAAGACTTACCATGTAATACCCAGCCAGGGTTATATACTTTACTCTGTAAGAAAGAAACTTAAACACGAGTACCTTGGCCTTCCTGGAAATGAGATCAAGAATTTGAAGTTGTCAGGTGTGGAGATAACCTACACTTTGGAAGAGCCAGAGGTTGCTTTCACAGGAGACACCATGGCAGATTTCATAGTTGATGATAATAACATTGATGTCTTGCGGGCCAGGATTCTTGTTATGGAGTGCACCTTTGTTAACGATTCAATTACAGTGGAGCATGCCAGGGATTATGGACACACTCATCTGTCCGAGATAATAAGTCTTGCTGGAAAGTTGCAAAACCGAGCAATCCTTCTAATTCACTTTTCAGCGCGCTACACAGAAGAGGAAATTCAGCAAGCCATAGCTGCATTGCCTCCACCATTAGCCGGTCGAACTTATGCACTTACAGAAGTAATGGGAGGTGCAGCAGCAGGAGTAGGACGCAATGGAACGGGCACTGTTGGTGTAAACTTCAATGGGATATATGAAGTTTGTGTGAAAAATGACAGAGACTACGTGCAGTCACGTGGGATGTGGAAGGGAGATAATCCATTCGACTTTGTGCTTCCTGTGATGTTAATGCAAATCTTCTTGTTCATTCTAACTTCAAGAGTCGTTTACTTTCTTCTCAGGCCTATAAGAACTCCCAAGTTCGTCTGCAGCCTCCTGGCTGGGATTCTACTGGGTCCTTCAGCTCTAGGGCGATGCAAGACATTCAAGAAGCTCATTTACCCTGGAGTACAAACCCAGCTATTATACTTATCATCCTCAATGGCCGTCGCATATTCCATCTTCCTCGTTGCCACGAAAATGGACGCAGCCACGAACCTGAGATTCGTCAAAAGAACATGGAAATTCGGCTTGATTCCCTTCCTCTCCTGTTTCTGGGTCATGTCAGGCCTCTTTCTCCTCATCCCCGACAGCTTCTCCGCCTACTCCTACATGAAGCCCGAAGCCTACATCCTGCTCTGCGTCACCACCTCGGTTTCCTTCTTCCCCGTCGTCTCCGAAAGCTTGCACGAATTAAACCTCGTAAACTCGGAGTTAGGCCAGATTGCCTTGTCCTCCTCCATGCTCAACGAGCTCATTCACTGGATTATTATTGCCGTCACCACAATATTTAAGAACAGAAACACGAAGCACAAATTAGAGTTCGTGCTAAGTTACTTTGGATTTATACTGTCCTGCGTTTTCATCATAAGGCCAGCGATGTTGATGATTGCTAGGAGCACACCACCGGGGAAGCCAGTGAAGGAGTGTTACGTTGTGATGATACAGGTTGGGGTCTTAGTGATTGGGCTCATAAGTGACGTTCTGGGCCTGGCTTTCATTCAGGGCCCACTCATTTTTGGCTTGGTCATGCCTATTGGGCCCCCATTGGCTACGATGGTAGCGGAGAGGACTGAGAGGATTAGAGATGATGGATGA 1914 0.453 MREKIEDSMSDKEEIRGADSFSKKAKDLIIEAYPIQGLSIGGQETCIIFPSLNTAFDIGRCPPRAVFQDFLLISHSHMDHIGGLPMYVATRGLYRMKPPTIIVPTSIKEDVEKLFEVHRKLDHSELKHNLVGLDVGEEFYLRNDLKVKAFKTYHVIPSQGYILYSVRKKLKHEYLGLPGNEIKNLKLSGVEITYTLEEPEVAFTGDTMADFIVDDNNIDVLRARILVMECTFVNDSITVEHARDYGHTHLSEIISLAGKLQNRAILLIHFSARYTEEEIQQAIAALPPPLAGRTYALTEVMGGAAAGVGRNGTGTVGVNFNGIYEVCVKNDRDYVQSRGMWKGDNPFDFVLPVMLMQIFLFILTSRVVYFLLRPIRTPKFVCSLLAGILLGPSALGRCKTFKKLIYPGVQTQLLYLSSSMAVAYSIFLVATKMDAATNLRFVKRTWKFGLIPFLSCFWVMSGLFLLIPDSFSAYSYMKPEAYILLCVTTSVSFFPVVSESLHELNLVNSELGQIALSSSMLNELIHWIIIAVTTIFKNRNTKHKLEFVLSYFGFILSCVFIIRPAMLMIARSTPPGKPVKECYVVMIQVGVLVIGLISDVLGLAFIQGPLIFGLVMPIGPPLATMVAERTERIRDDG 637
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere13g1986 637 Gene3D - 353 636 IPR038770 -
Dere13g1986 637 Gene3D - 34 289 IPR036866 -
Dere13g1986 637 SUPERFAMILY Metallo-hydrolase/oxidoreductase 69 287 IPR036866 -
Dere13g1986 637 PANTHER TRNASE Z TRZ1 4 299 - -
Dere13g1986 637 Pfam Beta-lactamase superfamily domain 69 270 IPR001279 -
Dere13g1986 637 CDD RNaseZ_MBL-fold 41 230 - -
Dere13g1986 637 Pfam Sodium/hydrogen exchanger family 358 635 IPR006153 GO:0006812|GO:0015297|GO:0016020|GO:0055085|GO:1902600
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere13g1986 Dere-ChrDere13 26964800 26974131 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere13g1986 335 635 Antiporter Super Family AT2G13620 33.441 4.78e-42 161