Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere13g1985 ATGTTAAGATCATTTCCATTGTCTAATAAGTTGACCATTCATCTTAATGGAAACCTCAAAATTGAAAGGTTTTGTACGTCGTTGCTTACAACAATTCCAAAACATGACAAACCATCCCAAGTGGGATGGCTTATGTTCATTCAGCAACCTAAAACTATTGCTATAAGTATGAAACTTGGGCTTACCACAACTGTTCCAATCAATACTGTTGTAGAAAAGGATAATTCTAATCTTATTGCATTCGTCAAATTAGCAATTTTTCATTATGAGTTAGAAGACAGCAATGCCATTGGAGGTGAGATCCAATTCCAGATAGAAGTTGAGATGATTAACTTAGCTGTGCATAGGAAACTCCTTTGCCTCTATGAATTTTGTATGACAGCTATTGAGAGGCTTTTGGTTTATCCTTACATGTCCAATGGTAGTGTTGCTTCACGTCTTAAAGGGGATTTTAGGTTGGCAAAGCTATTAGATCACCATGATTCTCATGTGACTACAGTTGTGAGAGGCATTGTTGGGAACATAGCCCCAGAGTATCTCTCAACAGGCCAATCTTGTGAAGAAAAAAAAAAAACAAATGTGTTTGGCTTTGGAATCTTTCTTCTTGAATTAATCTTAGGTCAGAGAACACTTGAATTTGGAAAAATGAAGAAGATCCATCAGGAGAAGAATCTTAAATTGTTAGTTGACAAGGACATGAAAAATAACTATGATAAAATTGTGCTTGAAGAAATAGTTCAAGTTGCTCTTTTGTGTACTAAATACTTTCCTAGTTATAAACCAAAGATGTCTGAAGTGGTTCGGATGCTTGAAGAAGATGGGCTTATAGAGAAATGGGAAGCCACACAGAGAGGTGATTTAACAAGAAGCTGA 873 0.3597 MLRSFPLSNKLTIHLNGNLKIERFCTSLLTTIPKHDKPSQVGWLMFIQQPKTIAISMKLGLTTTVPINTVVEKDNSNLIAFVKLAIFHYELEDSNAIGGEIQFQIEVEMINLAVHRKLLCLYEFCMTAIERLLVYPYMSNGSVASRLKGDFRLAKLLDHHDSHVTTVVRGIVGNIAPEYLSTGQSCEEKKKTNVFGFGIFLLELILGQRTLEFGKMKKIHQEKNLKLLVDKDMKNNYDKIVLEEIVQVALLCTKYFPSYKPKMSEVVRMLEEDGLIEKWEATQRGDLTRS 290
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere13g1985 290 Gene3D Transferase(Phosphotransferase) domain 1 141 290 - -
Dere13g1985 290 PANTHER SOMATIC EMBRYOGENESIS RECEPTOR KINASE 1 91 281 - -
Dere13g1985 290 Pfam Protein tyrosine and serine/threonine kinase 149 270 IPR001245 GO:0004672|GO:0006468
Dere13g1985 290 Gene3D Phosphorylase Kinase; domain 1 73 137 - -
Dere13g1985 290 SUPERFAMILY Protein kinase-like (PK-like) 96 273 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere13g1985 Dere-ChrDere13 26953318 26956486 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere13g1985 90 286 Receptor kinase-like Gene Family AT5G16000 55.725 2.62e-85 266
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-II Dere13g1985 PK_Tyr_Ser-Thr 9.2e-06 CL0016