Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere13g1963 ATGGAGCTAAATGTTCTTTTGAAGGAAACAACATGTCTCAGACCCAGTGAACAGTCCAAAACACAACCCATTATAATTGAGCTTTCAGGTTTGGACAGGATATCCCCGGCAATTATCTACACAGTGTTCTTTTATAAGTACTGTGTGGAAGAAGAAGCAGTCGAGAAAGCGAAACAAGCCATTCCAAAGGTGCTTATTTCGTGGTATCCGGCTGCTGGTAGGTTAAGGATAAATGAGATCACAGGGAAGCTTGAAATTGATTGCAATAATGAAGGTGTCACCATGGCCTCAGCAGTGTGCGATTCCAAGCTTGAAGATCTTGGGAGGCTCCATGAATACAAAACCTTCTATGAAAAGCTCGTTCCTCAGCTTCCTGAAGTTGATGATATATCCAAAAATCCGCTCCTTGCTGTGCAGAGTGTTGCTGATATAGTTACTGATTCTTTTTGGCTTGAAGTTTATAATAAGATAACAAGGTTCAGTTGTGGAGGATGCTCAGTTGGGTTTGGAGGCAACCATGCGTTGTTTGATGGATGTGGAGCATTCAACTTCCTAGCATCATGGGCTCACATATCAAGTGGGAAGGATGAATCTGAACTCATTCCACCAAATCATTCAAGACAAGCACTTTTAAGTGCCATTAGTTTTCCCAGTACTACTGCTGCTTCAATTTATGAACAAAGTCACGTTGTGGCTATTCAGGATCTGTATGGCATCCCAGTGCAAGCAGTGGCCTCAGATGACAGGTGCTGGGGAACTTATTCCATGGGAAAATTGAGCCCCCATGATCCTCATGGTGCGATTGAACTTCTCACACTGTGTGTGAAGAAAGAAACTACAGAGGCATGGAAAAGAATAGCCATAGAAAGAGGCAAGCTTTCTAGGTGCTCCACTTTTGATGTTCTATGCGCACATGTTTGGAAGGCCAGAGTGAAATCGCTTCTTCTGAATCCAGACACCAACATATGTTTGCAATTTCCTGTGGACTCCCGCAGCAGATTCCAACCCCAACTTGGCAAAAACTTCACAGGAAATGCCTTTGTTCTTGGCTCAGTGTCATGCATGGTGAAAACCCTACTAGAAGAGCCTCTTCACATCACAATTCAGAAGATTCAAGCGGCCAAACAAGTCATAACAGATGAATACGTGAGGCTATACACAATGGCCCTTGAGTCCTCCGACAAGTTCTTGCCTTCCATGCGAGAACTCACCATTGTCACTGACTGGATGAAATTCCCATTCCATGCATTGGACTTTGGATTTGGACATGTCTCTGATGCTGCCATCCTAGCAACTCCGGTCCCAGAAACTGCTTTTCTGATGCCAAATCTCGAAGAACCTTCGGGTTTTCGGGTTCGGATCGGAATTGAGAAACAGCATGTACCTGAATTCATCAGCAACTTCAATGATCTTGAGATAGTCAAGGTGTAA 1431 0.4396 MELNVLLKETTCLRPSEQSKTQPIIIELSGLDRISPAIIYTVFFYKYCVEEEAVEKAKQAIPKVLISWYPAAGRLRINEITGKLEIDCNNEGVTMASAVCDSKLEDLGRLHEYKTFYEKLVPQLPEVDDISKNPLLAVQSVADIVTDSFWLEVYNKITRFSCGGCSVGFGGNHALFDGCGAFNFLASWAHISSGKDESELIPPNHSRQALLSAISFPSTTAASIYEQSHVVAIQDLYGIPVQAVASDDRCWGTYSMGKLSPHDPHGAIELLTLCVKKETTEAWKRIAIERGKLSRCSTFDVLCAHVWKARVKSLLLNPDTNICLQFPVDSRSRFQPQLGKNFTGNAFVLGSVSCMVKTLLEEPLHITIQKIQAAKQVITDEYVRLYTMALESSDKFLPSMRELTIVTDWMKFPFHALDFGFGHVSDAAILATPVPETAFLMPNLEEPSGFRVRIGIEKQHVPEFISNFNDLEIVKV 476
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere13g1963 476 Gene3D - 256 468 IPR023213 -
Dere13g1963 476 Pfam Transferase family 5 469 - -
Dere13g1963 476 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 21 425 - -
Dere13g1963 476 Coils Coil 476 476 - -
Dere13g1963 476 Gene3D - 1 224 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere13g1963 Dere-ChrDere13 26714781 26717586 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere13g1963 1 464 Monolignol Biosynthesis Gene Families AT5G48930 25.053 2.92e-33 129