Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere13g1956 ATGGATGCATACAAGGCTTTAATGATCGTAGCAGCAATTGCAGCCTATAAAGTTATCAGAATCATCTCTCGTTCACTCCATGCTTTCCATCCAGTTATAGCTGACAGCTCTAATGATGAAACAGTTCCAATTTCAATGGATTCTTCTTCTTCATCATCTTTCAATATTACTGATGCTACTCCTCCTAAAATCAAGCCTGAGTCAACACTTATTGTTGAAATAGTGAATGATATCTTAAAGAAACTAAATCACATATCCTCCTGCCATTTTGAAGGGCTGGTTGGCATTCATCCTCATATTAACAATGTTGAAGCATTATTATCCTTGAAATCACCAGATGTTCGTACTTTGGGAATATGGGCGAAGGTGCGAGAACAGATAGCAAGTATTGGATTGGACAAGCTACAAAGAGAGTGTCTTTCAAAAGTCCTAGATGACAACGATTGCGGCACTTACAGCATCAACTCCACTTACGTGAAGAACAGGCTTCAACGCAAAAAGATTCTTCTTGTTCTTGATGATGTGGATAGGGCTGACAGAATTCGAAGCATTTCTCTTGATATGTCTGACAATGAGCACCTCATCAGACTCCCAGATCTCTCCCAGACACCGAATATTGAATACATATCTCTTGACGGTTGTGTAAATTTGGTTCAAGTTCATTCTTCAGATACATTGGTCCATCTTCGTTCTTTATACATGCTTGGTTGCTTCAAGCTAAGGCGTGTAAATCTTGGTAGCAACATTCATCCAACAAGTTCAAAGCTGTTGTTTGTCAACAATTATTGCATTATGAAGATGTCATTCCTAGAAGTGAGCATTAAGGCCTTAATATCCCAAGAAGGCAACATCTGTGGGTTTCAATTTAAAGGAGTAATGGTACCATTGCATGACAATCACGGCAACACCTATGATATATACGGTGAAGAGTTAAAATTTTTGGTTTCATCACTTCCATTTGTTCTCAAAGTTTGTTGGTTAGATTTTAGCTCATCATTTGAGATTGGAAGACAACATTTTGAGACGCATGTAGACTATTTCAAACTTTCTCCAATATTAGAAGGACATCAGTTTGAGGTGAAATTACCAAAGCGAGATATGTTTGAGGAAGCAAATGGTCTAACGTATTCAAGCATGAAAGGAACATCAACACCACTAGAAGATGTTGTCTTGTGTTTGGAAGAGTTGGCAGACCCTGAGAACGTTACAGATGATTGTGATGGTTATGCAAAAGCTGCTATTTAG 1245 0.3831 MDAYKALMIVAAIAAYKVIRIISRSLHAFHPVIADSSNDETVPISMDSSSSSSFNITDATPPKIKPESTLIVEIVNDILKKLNHISSCHFEGLVGIHPHINNVEALLSLKSPDVRTLGIWAKVREQIASIGLDKLQRECLSKVLDDNDCGTYSINSTYVKNRLQRKKILLVLDDVDRADRIRSISLDMSDNEHLIRLPDLSQTPNIEYISLDGCVNLVQVHSSDTLVHLRSLYMLGCFKLRRVNLGSNIHPTSSKLLFVNNYCIMKMSFLEVSIKALISQEGNICGFQFKGVMVPLHDNHGNTYDIYGEELKFLVSSLPFVLKVCWLDFSSSFEIGRQHFETHVDYFKLSPILEGHQFEVKLPKRDMFEEANGLTYSSMKGTSTPLEDVVLCLEELADPENVTDDCDGYAKAAI 414
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere13g1956 414 Gene3D - 99 196 IPR027417 -
Dere13g1956 414 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 83 221 IPR027417 -
Dere13g1956 414 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 42 181 IPR044974 GO:0006952
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere13g1956 Dere-ChrDere13 26576483 26580401 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere13g1956 65 176 WRKY Transcription Factor Family AT4G12020 29.577 1.00e-07 52.8